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The map label for this gene is epsD [H]

Identifier: 107021969

GI number: 107021969

Start: 454625

End: 455761

Strand: Reverse

Name: epsD [H]

Synonym: Bcen_0411

Alternate gene names: 107021969

Gene position: 455761-454625 (Counterclockwise)

Preceding gene: 107021970

Following gene: 107021968

Centisome position: 13.83

GC content: 69.22

Gene sequence:

>1137_bases
ATGGCCGCCACCTCCCCGCTGCGCATCGCGCTCGTCTGCAACACGGCCTGGGCGATCCATACGTATCGCCACGGGCTGAT
CCGTGCGCTCGTCGCGCGCGGCGCCGAGGTCATCGTGATCGCGCCGCACGACCGCACGGTGCCGTTGCTCGAGCAGATGG
GCTGCCGCTACGTGGCGCTCGCCATCGCGTCGAAAGGCACGAGCCCGCGCGAGGATCTCGGCACGCTCGCCGCGCTGGTG
CGTCACTACGGCGCGCTGCGGCCCGATCTCGTGTTCCATTACACGATCAAGCCGAACATCTACGGCTCGGTGGCCGCGTG
GCTCGCGCGCGTGCCGTCGATCGCCGTGACGACGGGCCTCGGCTACGTGTTCATCCAGAAAAGCCGCGCGGCGAGCGTCG
CGAAGCGACTGTACCGGTTCGCGTTCCGCTTCCCGCGTGAGGTGTGGTTCCTGAACCGCGACGATCTCGCGACCTTCACC
GACGAGCGCTTGCTCGCGCATCCCGACCGTGCGCGGCTGCTGCACGGCGAAGGCGTCGATCTCGAACAGTTCTCGCCCGT
GCCGCTGCCGGGCGGCGACGCCCCCGTCTTCATCCTGATCGGCCGGCTGCTGTGGGACAAGGGCGTGCGCGAATACGTGG
AGGCCGCGCGTCTCGTGCGCGAGCGCTTCCCGAATGCGCGCTTCCAGCTGCTCGGGCCGCTCGGCGTCGACAATCCGAGC
GCGATCGGTCGCGCGGACGTCGACGCGTGGGTCGGCGAAGGCATCGTCGAGTATCTCGGCGAAGCGCACGACGTGCGACC
GCACATCGCGGCGGCCGACTGCGTCGTGCTGCCGTCGTACCGCGAAGGCGTGCCGCGCACGCTGATGGAAGCTTCGGCGA
TGGGCCGCCCGATCGTCGCGACCGACGTGCCGGGCTGCCGCGACGTCGTCGCCGACGGCGAAACGGGTTACCTGTGCCGC
GTGCGCGACAGCGCGAGCCTTGCCGAACAATTGAATCGCATGATCGCGCTCGGGCCGCAAGGCCGGGCGACGATGGGCGC
ACGCGGCCGGCACAAGGTCGCGGCGGAATTCGACGAACAGCAGGTCGTCGAACGCTACAGGGAGACCATCCATTCGTTGA
CAGGATTCACACTCTGA

Upstream 100 bases:

>100_bases
CTGCAGCGCATCAAGCAGACGCTGTTCGCCGCGCGACCGTCCGCCTGACGCGCACCCGGCCCCGTTCGCCCATTTCGACG
CTTTATTTTTTCTTTTTTTC

Downstream 100 bases:

>100_bases
AGGAGCGCATCAGCAATGACCGCTAAAGGCACCATCCTCGTTACCGGCGGCGCGGGCTATATCGGCTCGCACACGGCCGT
CGAGCTGCTCGACAACGGCT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAATSPLRIALVCNTAWAIHTYRHGLIRALVARGAEVIVIAPHDRTVPLLEQMGCRYVALAIASKGTSPREDLGTLAALV
RHYGALRPDLVFHYTIKPNIYGSVAAWLARVPSIAVTTGLGYVFIQKSRAASVAKRLYRFAFRFPREVWFLNRDDLATFT
DERLLAHPDRARLLHGEGVDLEQFSPVPLPGGDAPVFILIGRLLWDKGVREYVEAARLVRERFPNARFQLLGPLGVDNPS
AIGRADVDAWVGEGIVEYLGEAHDVRPHIAAADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGYLCR
VRDSASLAEQLNRMIALGPQGRATMGARGRHKVAAEFDEQQVVERYRETIHSLTGFTL

Sequences:

>Translated_378_residues
MAATSPLRIALVCNTAWAIHTYRHGLIRALVARGAEVIVIAPHDRTVPLLEQMGCRYVALAIASKGTSPREDLGTLAALV
RHYGALRPDLVFHYTIKPNIYGSVAAWLARVPSIAVTTGLGYVFIQKSRAASVAKRLYRFAFRFPREVWFLNRDDLATFT
DERLLAHPDRARLLHGEGVDLEQFSPVPLPGGDAPVFILIGRLLWDKGVREYVEAARLVRERFPNARFQLLGPLGVDNPS
AIGRADVDAWVGEGIVEYLGEAHDVRPHIAAADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGYLCR
VRDSASLAEQLNRMIALGPQGRATMGARGRHKVAAEFDEQQVVERYRETIHSLTGFTL
>Mature_377_residues
AATSPLRIALVCNTAWAIHTYRHGLIRALVARGAEVIVIAPHDRTVPLLEQMGCRYVALAIASKGTSPREDLGTLAALVR
HYGALRPDLVFHYTIKPNIYGSVAAWLARVPSIAVTTGLGYVFIQKSRAASVAKRLYRFAFRFPREVWFLNRDDLATFTD
ERLLAHPDRARLLHGEGVDLEQFSPVPLPGGDAPVFILIGRLLWDKGVREYVEAARLVRERFPNARFQLLGPLGVDNPSA
IGRADVDAWVGEGIVEYLGEAHDVRPHIAAADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADGETGYLCRV
RDSASLAEQLNRMIALGPQGRATMGARGRHKVAAEFDEQQVVERYRETIHSLTGFTL

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=203, Percent_Identity=32.0197044334975, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41590; Mature: 41459

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATSPLRIALVCNTAWAIHTYRHGLIRALVARGAEVIVIAPHDRTVPLLEQMGCRYVAL
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCEEEE
AIASKGTSPREDLGTLAALVRHYGALRPDLVFHYTIKPNIYGSVAAWLARVPSIAVTTGL
EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCC
GYVFIQKSRAASVAKRLYRFAFRFPREVWFLNRDDLATFTDERLLAHPDRARLLHGEGVD
CEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHCCCHHHCCCCHHHEECCCCCC
LEQFSPVPLPGGDAPVFILIGRLLWDKGVREYVEAARLVRERFPNARFQLLGPLGVDNPS
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
AIGRADVDAWVGEGIVEYLGEAHDVRPHIAAADCVVLPSYREGVPRTLMEASAMGRPIVA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHHCCCCEEE
TDVPGCRDVVADGETGYLCRVRDSASLAEQLNRMIALGPQGRATMGARGRHKVAAEFDEQ
ECCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCHH
QVVERYRETIHSLTGFTL
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AATSPLRIALVCNTAWAIHTYRHGLIRALVARGAEVIVIAPHDRTVPLLEQMGCRYVAL
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCEEEE
AIASKGTSPREDLGTLAALVRHYGALRPDLVFHYTIKPNIYGSVAAWLARVPSIAVTTGL
EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECCC
GYVFIQKSRAASVAKRLYRFAFRFPREVWFLNRDDLATFTDERLLAHPDRARLLHGEGVD
CEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHCCCHHHCCCCHHHEECCCCCC
LEQFSPVPLPGGDAPVFILIGRLLWDKGVREYVEAARLVRERFPNARFQLLGPLGVDNPS
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
AIGRADVDAWVGEGIVEYLGEAHDVRPHIAAADCVVLPSYREGVPRTLMEASAMGRPIVA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHHCCCCEEE
TDVPGCRDVVADGETGYLCRVRDSASLAEQLNRMIALGPQGRATMGARGRHKVAAEFDEQ
ECCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCHH
QVVERYRETIHSLTGFTL
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]