Click here to switch to the map view.

The map label for this gene is arcB [H]

Identifier: 107021923

GI number: 107021923

Start: 406869

End: 407843

Strand: Reverse

Name: arcB [H]

Synonym: Bcen_0365

Alternate gene names: 107021923

Gene position: 407843-406869 (Counterclockwise)

Preceding gene: 107021928

Following gene: 107021922

Centisome position: 12.38

GC content: 72.72

Gene sequence:

>975_bases
ATGACGCAAACCGTCCCTACCCTGCCGCTGACCGTCGACGAAGCCGCGGTGCGCGCGGCGCTGCCATCGCTCGACGTGCT
CGGCACGCTGCGTCGCATGTTCGCGTCGCTCGCCGCGGCGCGCGCGGTGCAGCCGCCGCAGACGCTCACGCTGTTTCCCG
ACCAGGCCGGCGACTTCATCACGTATCTCGGCGCACTCGCCGACGCACAGGTATTCGGCGCGAAGCTGTCGCCGTACGTC
GTGACGGGCGGCAAGCCCGACGGGAAACCGATCGTCACCGCATGGACCGCATTGATGTCGATGCAGACCGGCCAGCCGCT
GATGTGGTGCGACGCCGGGCTGCTGACCGTCGAGCGCACGGCCGGCACGACGGCGCTCGCGGTCGACTGCCTCGCGCCGC
GCGACGCGCGCCATCTCGCGATCGTCGGCGCGGGCGCGGTCGGCCTTGCACACCTGAAGCACACGGCGGCACTGCGCGAC
TGGGCCTCGATCCGCGTGTACTCGCCCGCGCTGGCCGGCAACGCGGCGCTGCAGGCGAGCCTCGCCGCGCTCGACCCGCG
CGCCCGCGCGGCGGCGAGCGTCGAGGCCTGCGTGCGCGACGCGGACGTGGTGATGCTGTGCACGTCGTCGGGCACGCCCG
TGCTCGGCGACGGGATGCTCACGCGCCCCGCGCTCGTCACGTCGATCAGTACGAACGTCGCACGTGCCCACGAAATCCCG
CCCGCATGGCTGCCGGACATGGACGTCTACTGCGACTACCGGCACACGACGCCCGCGAGCGCCGGCGAGATGCAGATCGC
GACGGCCGAGCACGGCTGGGATGCCGGCCGGATCGTCGGCGACCTGCCCGCGCTCGTCGCCGGCACCTGCGCGGCGCCGT
CGCGCACGCGTCACGCGCTGTTCCGCTCGATCGGCCTCGGGCTCGAGGACATCGCGATCGCGCACGCGCTGTACACGCAT
CTGACGCACGCATGA

Upstream 100 bases:

>100_bases
ACCGGTTTTGTTTGTCTATATTAGACTTTTAGTCTACAACCAACCCCACCGGACGCCGTCTTTCGAGACTTTCCGTCCAG
CCCGAACCGGAGATGTCCCC

Downstream 100 bases:

>100_bases
GCGGCACGCGCACGCGGGGCCGATACAATGGCGCAACCGCCGCAGCGGCCGCGCGCGGGCGCACGGGCATGCCGCCCCAC
GGTGCGCCGGCGCGCCGGCC

Product: ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTQTVPTLPLTVDEAAVRAALPSLDVLGTLRRMFASLAAARAVQPPQTLTLFPDQAGDFITYLGALADAQVFGAKLSPYV
VTGGKPDGKPIVTAWTALMSMQTGQPLMWCDAGLLTVERTAGTTALAVDCLAPRDARHLAIVGAGAVGLAHLKHTAALRD
WASIRVYSPALAGNAALQASLAALDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIP
PAWLPDMDVYCDYRHTTPASAGEMQIATAEHGWDAGRIVGDLPALVAGTCAAPSRTRHALFRSIGLGLEDIAIAHALYTH
LTHA

Sequences:

>Translated_324_residues
MTQTVPTLPLTVDEAAVRAALPSLDVLGTLRRMFASLAAARAVQPPQTLTLFPDQAGDFITYLGALADAQVFGAKLSPYV
VTGGKPDGKPIVTAWTALMSMQTGQPLMWCDAGLLTVERTAGTTALAVDCLAPRDARHLAIVGAGAVGLAHLKHTAALRD
WASIRVYSPALAGNAALQASLAALDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIP
PAWLPDMDVYCDYRHTTPASAGEMQIATAEHGWDAGRIVGDLPALVAGTCAAPSRTRHALFRSIGLGLEDIAIAHALYTH
LTHA
>Mature_323_residues
TQTVPTLPLTVDEAAVRAALPSLDVLGTLRRMFASLAAARAVQPPQTLTLFPDQAGDFITYLGALADAQVFGAKLSPYVV
TGGKPDGKPIVTAWTALMSMQTGQPLMWCDAGLLTVERTAGTTALAVDCLAPRDARHLAIVGAGAVGLAHLKHTAALRDW
ASIRVYSPALAGNAALQASLAALDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIPP
AWLPDMDVYCDYRHTTPASAGEMQIATAEHGWDAGRIVGDLPALVAGTCAAPSRTRHALFRSIGLGLEDIAIAHALYTHL
THA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33738; Mature: 33607

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTVPTLPLTVDEAAVRAALPSLDVLGTLRRMFASLAAARAVQPPQTLTLFPDQAGDFI
CCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
TYLGALADAQVFGAKLSPYVVTGGKPDGKPIVTAWTALMSMQTGQPLMWCDAGLLTVERT
HHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEEECC
AGTTALAVDCLAPRDARHLAIVGAGAVGLAHLKHTAALRDWASIRVYSPALAGNAALQAS
CCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHH
LAALDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIP
HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC
PAWLPDMDVYCDYRHTTPASAGEMQIATAEHGWDAGRIVGDLPALVAGTCAAPSRTRHAL
CCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
FRSIGLGLEDIAIAHALYTHLTHA
HHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTVPTLPLTVDEAAVRAALPSLDVLGTLRRMFASLAAARAVQPPQTLTLFPDQAGDFI
CCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
TYLGALADAQVFGAKLSPYVVTGGKPDGKPIVTAWTALMSMQTGQPLMWCDAGLLTVERT
HHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEEECC
AGTTALAVDCLAPRDARHLAIVGAGAVGLAHLKHTAALRDWASIRVYSPALAGNAALQAS
CCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHH
LAALDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIP
HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC
PAWLPDMDVYCDYRHTTPASAGEMQIATAEHGWDAGRIVGDLPALVAGTCAAPSRTRHAL
CCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
FRSIGLGLEDIAIAHALYTHLTHA
HHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]