| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is yheO [C]
Identifier: 107021922
GI number: 107021922
Start: 406078
End: 406800
Strand: Reverse
Name: yheO [C]
Synonym: Bcen_0364
Alternate gene names: 107021922
Gene position: 406800-406078 (Counterclockwise)
Preceding gene: 107021923
Following gene: 107021921
Centisome position: 12.35
GC content: 66.67
Gene sequence:
>723_bases ATGCCGCCCCACGGTGCGCCGGCGCGCCGGCCCGACACGCTGCCCGGCTCCCGCCCACCCGAGATCGCGACACCGATGCG CAAGAAGAAATCTCCCGTCAAAGACCTGCTGCTCACCCGCTATGCGCCGATCGCCGACGGTATCGCCGCCCTGTTCTTCC CGTACGCGGAAGTCGTGATCCACGACCTGCACGACCAGACCGTGCTGTATCTCGCGAACAACTTGTCGAAGCGCGAGGTC GGCGATGATTCCGCGCTCGAGGAAATCGATCATTCGGCGCGCGAGCGCGTGATCGGCCCGTACGAGAAGCTGAACTGGGA CGGCCGGCGGATGCGCTGCGTCAGCAACGTGCTGTTCGACGACGAAGGCCGGCCGGCCGGGATGATGTGCATCAACTTCA ACATCGCGGTGTTCGACGAGGTACGCGCGACGCTCGACCTGTTCATCAAGGGCGCGGGCGTCGTCGCGCAACCCGACGAA CTGTTCCGCGACGACTGGCAGGAGCGCATCAACACGTTCCTGCACGGCTGGCTGCGCGAGCGGCAGGTCGGGCTGAACGG GCTCACGCGCGAGCACCGGCGCGAACTCGTCGAGGCGCTGTACGCCGAAGGCGCGTTCCGCGGCAAGAGCGCGGCGAACT ACGTCGCGAACGTGCTCGGGATGGGACGCGCGACGGTCTACAAGCACCTCAAGCACCTGAAGGAAACGCAGGGCGACGCC TGA
Upstream 100 bases:
>100_bases ACGCGCTGTACACGCATCTGACGCACGCATGAGCGGCACGCGCACGCGGGGCCGATACAATGGCGCAACCGCCGCAGCGG CCGCGCGCGGGCGCACGGGC
Downstream 100 bases:
>100_bases GCGCGATGCGGCGGGCGTGATGACGGCACGCTCCGGACACCGGTACCGGACTGCCGATTCCGCGTCGAGCCTTCGCGATG CGAGGGCGTGCCCCGGATTC
Product: YheO-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPPHGAPARRPDTLPGSRPPEIATPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVIHDLHDQTVLYLANNLSKREV GDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFDDEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDE LFRDDWQERINTFLHGWLRERQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA
Sequences:
>Translated_240_residues MPPHGAPARRPDTLPGSRPPEIATPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVIHDLHDQTVLYLANNLSKREV GDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFDDEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDE LFRDDWQERINTFLHGWLRERQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA >Mature_239_residues PPHGAPARRPDTLPGSRPPEIATPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVIHDLHDQTVLYLANNLSKREVG DDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFDDEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDEL FRDDWQERINTFLHGWLRERQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA
Specific function: Unknown
COG id: COG2964
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yheO [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013559 - ProDom: PD037769 [H]
Pfam domain/function: PF08348 PAS_6 [H]
EC number: NA
Molecular weight: Translated: 27058; Mature: 26927
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHGAPARRPDTLPGSRPPEIATPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HDLHDQTVLYLANNLSKREVGDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFD HHHCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHC DEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDELFRDDWQERINTFLHGWLRE CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPHGAPARRPDTLPGSRPPEIATPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVI CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HDLHDQTVLYLANNLSKREVGDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFD HHHCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHC DEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDELFRDDWQERINTFLHGWLRE CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]