| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021847
Identifier: 107021847
GI number: 107021847
Start: 319709
End: 321103
Strand: Reverse
Name: 107021847
Synonym: Bcen_0289
Alternate gene names: NA
Gene position: 321103-319709 (Counterclockwise)
Preceding gene: 107021848
Following gene: 107021846
Centisome position: 9.75
GC content: 50.47
Gene sequence:
>1395_bases ATGATAGAAAATCTTTTCATGAGCGTCGGGGCAATGAAGGCGTCGACATCGTGGCTTTATACACAACTGAAAGACCACAG CGACATCTATTTTCCACCTCAAAAGGAAATTCATTATTTCTCGCATGTACGTCAGCAATGCGACTTCGAGTCACGGGACA ATCGAGTCCGCGCACTAGCTTCCTATCTCGATCAGCAGAACGGCTACCCGGGTGACTTTGTGGAAGACAACGTTACTGAT TTCAAATGGTTTGGACGGTATGCTGCTCAGCACGAAGTTGATGATCGATGGTATCAATCACTGTATCAGGATTCCGGGAC CGCAAAGTACTGCGCCGATTTTTCGAACTTGAACGGCTGCCTCGATGAGGCGGGTTGGCAGTTGGTCCGCGCCAACACCA ATAATATTCGTGCAATCTATGTGCTACGTGATCCGCTTGAACGGGTTTGGTCACATTATAAGTTCGAGTTAGCGTGGAAC GGACTCGCCCACGAAATTTCGCACGAATACTTTAAGCGCTTCCAAGAGACACTCGACCAAGAATGGTTCTGGAAGCACGC ACGTTACGACGAAATCGTCAAAAATCTTAGGAGCTTTCTCGCGAACCATGAGTTGCGAATTTTCTACTTCGAAGATTTTC GCCGGACTCCTCGGGAGGCATTGGCAAGGGTCTGCGATTTCCTCGAAATCGAGCATCAATTCCCAGCGATCGACAACGCA AGCGACAAAGTAAATTCATCTCCGGACGTTCCGATCCCCGACGAATTCCTAGTTTATCTGGCGGACCGACTACAGCCTGT CTATGACGAACTCGACAAGCTCGGAATCAATCATGTCGGTTGGCGTCGCCATGAACAAAGCTTGGCAGCCATTTCACGGC GGAGCCAACGCGTAACCGCATCAGACTACTACTCCGAAGATCCGCTTGTGCTTCGAGCGTTGATCGACAAATACGAGAAA GAGTTAAGCTCACTCGGTACGATGCTCGGAAGCAGGGCTGAGGAGATTACGAGCCTTCGACAGTTGAGCCAGAAATACGA AAAACGCATCCTTGAACAAGATCGGATCATCTCCGATCTTAACCGCCGTGCCGCAGCATCTGACTCGACTATGTTTGAAA CGCATGCTGCGGATTACGATGTAGCGCAGACGGCAATTGGCTCCGCATTTTCCGATCAAATCGCCATGGTTGGGAACGAG AAAAAATTTGTTCCGGCCCCTGACGATAGGAGTGATGCTACGAAGAACGCCACCCTTATCGGTATGTCGCTCGATTCCGC TATCACGCCGTCGGATGGCGGGCAGTTATTATCTAGTTCAAGTGTCGGTTCAGCAGGAGCAACAGGGCAAATCGTCGCGT CAGACATTCACGGCCCGGATAGCGGCACTCCGTGA
Upstream 100 bases:
>100_bases GAAAGTACAAACAAAAATCCGTATCACACAATACACGCTACTCGGCACAACAGATTAGTCAACTGGCGGGACTTTTCAAC CATAAGCTGACACAACAAAA
Downstream 100 bases:
>100_bases CCACGCCAAAGACCGACGTGTCAACGTGCTCTGTCGCGCCTAGGACATATACACTTCGACAACACGTTCCGCGCGCGATA ATGATGCCGATCGGCTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP
Sequences:
>Translated_464_residues MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP >Mature_464_residues MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALASYLDQQNGYPGDFVEDNVTD FKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGCLDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWN GLAHEISHEYFKRFQETLDQEWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTASDYYSEDPLVLRALIDKYEK ELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDLNRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNE KKFVPAPDDRSDATKNATLIGMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53117; Mature: 53117
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH SYLDQQNGYPGDFVEDNVTDFKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGC HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH LDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWNGLAHEISHEYFKRFQETLDQ HHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH EWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCH SDYYSEDPLVLRALIDKYEKELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNEKKFVPAPDDRSDATKNATLI HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEEE GMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP EEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MIENLFMSVGAMKASTSWLYTQLKDHSDIYFPPQKEIHYFSHVRQQCDFESRDNRVRALA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH SYLDQQNGYPGDFVEDNVTDFKWFGRYAAQHEVDDRWYQSLYQDSGTAKYCADFSNLNGC HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH LDEAGWQLVRANTNNIRAIYVLRDPLERVWSHYKFELAWNGLAHEISHEYFKRFQETLDQ HHHHCCEEEEECCCCEEEEEEEHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH EWFWKHARYDEIVKNLRSFLANHELRIFYFEDFRRTPREALARVCDFLEIEHQFPAIDNA HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC SDKVNSSPDVPIPDEFLVYLADRLQPVYDELDKLGINHVGWRRHEQSLAAISRRSQRVTA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCH SDYYSEDPLVLRALIDKYEKELSSLGTMLGSRAEEITSLRQLSQKYEKRILEQDRIISDL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRRAAASDSTMFETHAADYDVAQTAIGSAFSDQIAMVGNEKKFVPAPDDRSDATKNATLI HHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCEEE GMSLDSAITPSDGGQLLSSSSVGSAGATGQIVASDIHGPDSGTP EEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA