| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021848
Identifier: 107021848
GI number: 107021848
Start: 321100
End: 322314
Strand: Reverse
Name: 107021848
Synonym: Bcen_0290
Alternate gene names: NA
Gene position: 322314-321100 (Counterclockwise)
Preceding gene: 107021849
Following gene: 107021847
Centisome position: 9.78
GC content: 49.47
Gene sequence:
>1215_bases ATGAGTAACAATAGACCGAAAATTGCCATCGTCAATGTCTTTTTCCCGCCACAAGCGATTGGCGGGGCAACTCGCGTCGT CGCGGACCAGGTGCAGCTTCTGTCAGAACAGTATTCGGAGAATTTCGATCTAGTCGTGTTCACAAGCGATGCGCACAGCC ATAAACCTTACTCGATACGCCCGTATATCTACAATGGAATACGCGTCTATTCGACGTCGATTTTATGGCGCATCAACATG GATTGGCATGACACCGATCCGGAAATCGGGGAAATTTTTGATCAGTTCCTGGAGTTCGAGAAGCCAGACCTGATTCACTT CCATTGCATCCAACGTCTCGGAGGAGGCATTGTCGAAGCAGCGCGAAACAGGGGCATCCCATATTATGTCACGGCGCATG ATGCATGGTGGATTTCAGATTATCAGTTTCTGACCGATATAAAAGGGAATATATATTCCGACGGGCATCCCGATCCATTT TCCAAGTATCACCTGCCAGACGGCGTTACTTGGGAAAAATCGCTCCAGCGTCGCAACTATCTCAAAGCGTTGTTAGCCGA CGCCGAAGGCGTATTATGCGTCTCCGAGACCTACACGAAACTCTATCAAAGCAACGGGATCTCCAACTGCATAACGAATC GCAATGGAATCTCCAATTTTGTGGATTGGAAAGCGAAAGATACCTCATATAGCAAGCGTGTCATTTGTGGACATATTGGC GGTATGGCCACCCATAAGGGGTTTTTTTTGTTTCGCGACGCCATTATGCAAAGCGCATCAAATCATATTGAGGCACTGAT CGTCGATCATTCTCAACCGGAGAATTTCTTCGAGAAAACACTCTGGGGTGATGTTCCCGTTACCATTATTGGTCGTGTCG CGCAGGACCGGATCGTTGACATCTACGGGCGCATCGATGTCCTGTTCGCGCCGTCGCTGTGGCCGGAAAGCTTCGGGTTG GTTACACGAGAAGCCGTTGCGTGCGGGTGCTGGGTTGTCGCGTCGAACGTCGGCGCTATCGGGGAAGAAGTTACCGCCGA AAATGGCTTTGTCGTGGATCCGACAACCGATGCGCTCTCCTCGGTACTGGAGACCATCCATCAAAATCCGGGAAAGTACA AACAAAAATCCGTATCACACAATACACGCTACTCGGCACAACAGATTAGTCAACTGGCGGGACTTTTCAACCATAAGCTG ACACAACAAAAATGA
Upstream 100 bases:
>100_bases GGTCGACTTATATGCCCGAAGCACTTTCCGAAAACATCGTCGAATTTCTTGAATCCGCTGTTCGTCAGCATGCTGGAATC TGATTACACGTCGTGAAGCC
Downstream 100 bases:
>100_bases TAGAAAATCTTTTCATGAGCGTCGGGGCAATGAAGGCGTCGACATCGTGGCTTTATACACAACTGAAAGACCACAGCGAC ATCTATTTTCCACCTCAAAA
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; LPS Biosynthesis RfbU Related Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Hexosyltransferase; Haloacid Dehalogenase Domain Protein Hydrolase
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSNNRPKIAIVNVFFPPQAIGGATRVVADQVQLLSEQYSENFDLVVFTSDAHSHKPYSIRPYIYNGIRVYSTSILWRINM DWHDTDPEIGEIFDQFLEFEKPDLIHFHCIQRLGGGIVEAARNRGIPYYVTAHDAWWISDYQFLTDIKGNIYSDGHPDPF SKYHLPDGVTWEKSLQRRNYLKALLADAEGVLCVSETYTKLYQSNGISNCITNRNGISNFVDWKAKDTSYSKRVICGHIG GMATHKGFFLFRDAIMQSASNHIEALIVDHSQPENFFEKTLWGDVPVTIIGRVAQDRIVDIYGRIDVLFAPSLWPESFGL VTREAVACGCWVVASNVGAIGEEVTAENGFVVDPTTDALSSVLETIHQNPGKYKQKSVSHNTRYSAQQISQLAGLFNHKL TQQK
Sequences:
>Translated_404_residues MSNNRPKIAIVNVFFPPQAIGGATRVVADQVQLLSEQYSENFDLVVFTSDAHSHKPYSIRPYIYNGIRVYSTSILWRINM DWHDTDPEIGEIFDQFLEFEKPDLIHFHCIQRLGGGIVEAARNRGIPYYVTAHDAWWISDYQFLTDIKGNIYSDGHPDPF SKYHLPDGVTWEKSLQRRNYLKALLADAEGVLCVSETYTKLYQSNGISNCITNRNGISNFVDWKAKDTSYSKRVICGHIG GMATHKGFFLFRDAIMQSASNHIEALIVDHSQPENFFEKTLWGDVPVTIIGRVAQDRIVDIYGRIDVLFAPSLWPESFGL VTREAVACGCWVVASNVGAIGEEVTAENGFVVDPTTDALSSVLETIHQNPGKYKQKSVSHNTRYSAQQISQLAGLFNHKL TQQK >Mature_403_residues SNNRPKIAIVNVFFPPQAIGGATRVVADQVQLLSEQYSENFDLVVFTSDAHSHKPYSIRPYIYNGIRVYSTSILWRINMD WHDTDPEIGEIFDQFLEFEKPDLIHFHCIQRLGGGIVEAARNRGIPYYVTAHDAWWISDYQFLTDIKGNIYSDGHPDPFS KYHLPDGVTWEKSLQRRNYLKALLADAEGVLCVSETYTKLYQSNGISNCITNRNGISNFVDWKAKDTSYSKRVICGHIGG MATHKGFFLFRDAIMQSASNHIEALIVDHSQPENFFEKTLWGDVPVTIIGRVAQDRIVDIYGRIDVLFAPSLWPESFGLV TREAVACGCWVVASNVGAIGEEVTAENGFVVDPTTDALSSVLETIHQNPGKYKQKSVSHNTRYSAQQISQLAGLFNHKLT QQK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45545; Mature: 45414
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNRPKIAIVNVFFPPQAIGGATRVVADQVQLLSEQYSENFDLVVFTSDAHSHKPYSIR CCCCCCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC PYIYNGIRVYSTSILWRINMDWHDTDPEIGEIFDQFLEFEKPDLIHFHCIQRLGGGIVEA CEEECCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH ARNRGIPYYVTAHDAWWISDYQFLTDIKGNIYSDGHPDPFSKYHLPDGVTWEKSLQRRNY HHCCCCCEEEEECCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LKALLADAEGVLCVSETYTKLYQSNGISNCITNRNGISNFVDWKAKDTSYSKRVICGHIG HHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCC GMATHKGFFLFRDAIMQSASNHIEALIVDHSQPENFFEKTLWGDVPVTIIGRVAQDRIVD CHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH IYGRIDVLFAPSLWPESFGLVTREAVACGCWVVASNVGAIGEEVTAENGFVVDPTTDALS HHCCEEEEECCCCCCCHHCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEECCCHHHHH SVLETIHQNPGKYKQKSVSHNTRYSAQQISQLAGLFNHKLTQQK HHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNNRPKIAIVNVFFPPQAIGGATRVVADQVQLLSEQYSENFDLVVFTSDAHSHKPYSIR CCCCCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEC PYIYNGIRVYSTSILWRINMDWHDTDPEIGEIFDQFLEFEKPDLIHFHCIQRLGGGIVEA CEEECCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH ARNRGIPYYVTAHDAWWISDYQFLTDIKGNIYSDGHPDPFSKYHLPDGVTWEKSLQRRNY HHCCCCCEEEEECCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LKALLADAEGVLCVSETYTKLYQSNGISNCITNRNGISNFVDWKAKDTSYSKRVICGHIG HHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCC GMATHKGFFLFRDAIMQSASNHIEALIVDHSQPENFFEKTLWGDVPVTIIGRVAQDRIVD CHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH IYGRIDVLFAPSLWPESFGLVTREAVACGCWVVASNVGAIGEEVTAENGFVVDPTTDALS HHCCEEEEECCCCCCCHHCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEECCCHHHHH SVLETIHQNPGKYKQKSVSHNTRYSAQQISQLAGLFNHKLTQQK HHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA