| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is dgk [H]
Identifier: 107021832
GI number: 107021832
Start: 298623
End: 299309
Strand: Reverse
Name: dgk [H]
Synonym: Bcen_0272
Alternate gene names: 107021832
Gene position: 299309-298623 (Counterclockwise)
Preceding gene: 107021833
Following gene: 107021831
Centisome position: 9.08
GC content: 66.96
Gene sequence:
>687_bases ATGAACTCGACTCCGCTGACCGTCACCGCGCCCGACCTGCGCGCCCCGCACCGCTATCTCGTGATCGAAGGGCCGATCGG CGTCGGCAAGACGTCGCTCGCGCGCCTGCTCGGCGAGCGCTGGTCGATGCAGACGCTGCTCGAGCGTCCGCAGGACAATC CGTTCCTCGAACGCTTCTACCGCGACACCGCGCGCTACGCGCTGCCGGTCCAGCTGTCGTTCGCGCTGCAGCGCGCGCAG CAGGCGCGCGAGCTGATCGGCGCGCTCGAAACCGGCCGCCCCGTCATCGCCGATTTCATGCCGCAGAAGAACGACATCTT CGCGCGGCTGAACCTGCCGGAAGACGAGTGGCAGCTGTATCGCTCGATCGCCACGCACGTCGACGTGCCGCAGGCGCCGT CGCCCGATCTCGTCGTCTATCTGCAGGCCAGCCCCGAAGTGCTGTTCTCGCGCATCCAGAAGCGCGGGCTGCCGATGGAA CTGCAGATCAGCGACGCGTACCTGCGCTCGCTCGTCGACGCGTACAACGAATTCTTCTACCACTACGACCGCACGCCGGT GCTGACGGTCGCAGCCGAACACCTGAACCCGCTGGATTCCCCCGACGATCTCGCCCTGCTGGTCGAGCGCATCGAGACGA TGCGCGGCCGCAAGGAATTCTTCGTCAAGGGCGAGACGACGCGCTGA
Upstream 100 bases:
>100_bases CCGCCGTCGCGGATCAGCGCGTCGAAAAGGTGCAAACCTGCCAGTGCCTGATGCAGAAGGCGCTCGCTGCCGGCGAAGAC GCCGACAAGACCCGCTGCCG
Downstream 100 bases:
>100_bases CGCGTCCCGCCTGTCGCTCTACCCCCATCGACCCGGATTTCCCATGACCTATCTCCAGGAATCGAGCCGGCCTGCCGTGA CGGTACCCAAGCTGCAGGCA
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNSTPLTVTAPDLRAPHRYLVIEGPIGVGKTSLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQ QARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSIATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPME LQISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVERIETMRGRKEFFVKGETTR
Sequences:
>Translated_228_residues MNSTPLTVTAPDLRAPHRYLVIEGPIGVGKTSLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQ QARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSIATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPME LQISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVERIETMRGRKEFFVKGETTR >Mature_228_residues MNSTPLTVTAPDLRAPHRYLVIEGPIGVGKTSLARLLGERWSMQTLLERPQDNPFLERFYRDTARYALPVQLSFALQRAQ QARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLYRSIATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPME LQISDAYLRSLVDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVERIETMRGRKEFFVKGETTR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 26140; Mature: 26140
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTPLTVTAPDLRAPHRYLVIEGPIGVGKTSLARLLGERWSMQTLLERPQDNPFLERFY CCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RDTARYALPVQLSFALQRAQQARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLY HHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCHHHHHHH RSIATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAYLRSLVDAYNEFFY HHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH HYDRTPVLTVAAEHLNPLDSPDDLALLVERIETMRGRKEFFVKGETTR HCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCC >Mature Secondary Structure MNSTPLTVTAPDLRAPHRYLVIEGPIGVGKTSLARLLGERWSMQTLLERPQDNPFLERFY CCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHH RDTARYALPVQLSFALQRAQQARELIGALETGRPVIADFMPQKNDIFARLNLPEDEWQLY HHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCHHHHHHH RSIATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAYLRSLVDAYNEFFY HHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH HYDRTPVLTVAAEHLNPLDSPDDLALLVERIETMRGRKEFFVKGETTR HCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]