| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is tgt [H]
Identifier: 107021798
GI number: 107021798
Start: 253913
End: 255256
Strand: Reverse
Name: tgt [H]
Synonym: Bcen_0238
Alternate gene names: 107021798
Gene position: 255256-253913 (Counterclockwise)
Preceding gene: 107021799
Following gene: 107021797
Centisome position: 7.75
GC content: 65.55
Gene sequence:
>1344_bases ATGCGCACGATGGCCGGCGCGTCGCACTGCCGCCGTGCCGTTTTTTACGTTGTGCGCGCTACGCTGGCGCGCACCCGCTT TTCCCCGCCGCCGATTTCCCGGGCGGCGTTTCCAACATGCGCCGGACTGTTTTCCGGTAGCAAGGAGAGCAACACGATGA CCGAAGGTTCATCCCACGATACGCACGCCCCCGTGCAGGACCGCCCGGCCAACGGGCTCGAATTCGAATTGCTGACGACC GACGGCCACGCGCGCCGCGGCCGCGTGAAGCTCAATCACGGCACGGTCGAGACACCGATCTTCATGCCGGTCGGCACGTA CGGCACCGTGAAGGCGATCCAGCCGCGCGAGCTGCACGAGATCAAGGCCCAGATCATCCTCGGCAACACGTTCCACCTGT GGCTGCGCCCGGGCCTCGACACGATCGACGCGCACGGCGGCCTGCACGGCTTCATGGGCTGGAACAAGCCGATCCTGACC GATTCGGGTGGCTTCCAGGTGTTCTCGCTCGGCGACCTGCGCAAGATCACCGAGGACGGCGTCACGTTCGCGTCGCCGAT CAACGGCGACAAGCTGTTCCTGTCGCCGGAAGTGTCGATGCAGATCCAGAAGGTGCTGAACTCCGACGTCGTGATGCAGT TCGACGAGTGCACGCCGTACGCGACCAACGGCGTGCCGACGACGCACCAGGAAGCGGCCGACTCGATGCGCATGTCGCTG CGCTGGGCGAAGCGCTCGCTCGACGAATTCCACCGGCTCGGCAACCCGAATGCGCTGTTCGGGATCGTCCAGGGCGGGAT GTTCGAGGACCTGCGCGACGAATCGCTCGCGGGCCTCGCGGAACTCGGCTTCCACGGCCTCGCGATCGGCGGGCTGTCGG TGGGCGAGCCGAAGGAAGACATGATGCGCGTGCTGCAGCACGTGGGCCCGAAGCTGCCGGCCAACAAGCCGCACTACCTG ATGGGCGTGGGCACGCCGGAGGATCTGGTCGAGGGCGTCGCGAACGGCATCGACATGTTCGACTGCGTGATGCCGACCCG CAACGCGCGCAACGGGTGGCTCTTCACGCGCTTCGGCGACGTGAAGATCCGCAACGCGACGCACAAGAACTCGTTGAAGC CGCTCGATTCGACCTGCACCTGCTACACGTGCCAGAACTTCTCGCGCGGCTACCTGCATCACCTGCACCGGGTCGGCGAA ATCCTCGGCGCGCAGCTGAACACGATCCACAACCTGCACTACTACCTGCAGCTGATGAGCGAGATCCGCGACGCGATCGA AACGCATACGTTCGACGCATTCCGGCAGCGCTTCGCGGAGGATCGCGCCAGAGGGGTCGACTGA
Upstream 100 bases:
>100_bases AACGCTACCGCTTCTTCAGCTACGGCGACGCGATGCTGCTCACGCGGCGCGACACGCCGGAGGCGCCGGGCGCGTAAGCG CAGCCGACGGCATCGGCTCG
Downstream 100 bases:
>100_bases CGGGCCGGCCGGCGGCCCGCACCGCGGCCAGTCACATAGGACGCGTACTAATTGGCACACTCAAATCGCCAGTCGCGACC GCCAAACATTACAATTACCT
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRTMAGASHCRRAVFYVVRATLARTRFSPPPISRAAFPTCAGLFSGSKESNTMTEGSSHDTHAPVQDRPANGLEFELLTT DGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILT DSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEAADSMRMSL RWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLSVGEPKEDMMRVLQHVGPKLPANKPHYL MGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGE ILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD
Sequences:
>Translated_447_residues MRTMAGASHCRRAVFYVVRATLARTRFSPPPISRAAFPTCAGLFSGSKESNTMTEGSSHDTHAPVQDRPANGLEFELLTT DGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILT DSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEAADSMRMSL RWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLSVGEPKEDMMRVLQHVGPKLPANKPHYL MGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGE ILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD >Mature_447_residues MRTMAGASHCRRAVFYVVRATLARTRFSPPPISRAAFPTCAGLFSGSKESNTMTEGSSHDTHAPVQDRPANGLEFELLTT DGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHEIKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILT DSGGFQVFSLGDLRKITEDGVTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEAADSMRMSL RWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLSVGEPKEDMMRVLQHVGPKLPANKPHYL MGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGE ILGAQLNTIHNLHYYLQLMSEIRDAIETHTFDAFRQRFAEDRARGVD
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=355, Percent_Identity=44.5070422535211, Blast_Score=296, Evalue=2e-80, Organism=Escherichia coli, GI1786607, Length=374, Percent_Identity=64.1711229946524, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17544680, Length=371, Percent_Identity=41.7789757412399, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI25146502, Length=164, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19920510, Length=355, Percent_Identity=44.5070422535211, Blast_Score=308, Evalue=7e-84, Organism=Drosophila melanogaster, GI21355311, Length=166, Percent_Identity=29.5180722891566, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 49555; Mature: 49555
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMAGASHCRRAVFYVVRATLARTRFSPPPISRAAFPTCAGLFSGSKESNTMTEGSSHD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCCCCCCCCCCCCCC THAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHE CCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCEECCCCHHHHH IKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGDLRKITEDG HEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCHHHHHHHCC VTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEAADSMRMSL CEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLSVGEPKED HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHH MMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGD HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECC VKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLQLMS EEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIRDAIETHTFDAFRQRFAEDRARGVD HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTMAGASHCRRAVFYVVRATLARTRFSPPPISRAAFPTCAGLFSGSKESNTMTEGSSHD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCCCCCCCCCCCCCCC THAPVQDRPANGLEFELLTTDGHARRGRVKLNHGTVETPIFMPVGTYGTVKAIQPRELHE CCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECCCCCCEECCCCHHHHH IKAQIILGNTFHLWLRPGLDTIDAHGGLHGFMGWNKPILTDSGGFQVFSLGDLRKITEDG HEEEEEECCEEEEEEECCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCHHHHHHHCC VTFASPINGDKLFLSPEVSMQIQKVLNSDVVMQFDECTPYATNGVPTTHQEAADSMRMSL CEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RWAKRSLDEFHRLGNPNALFGIVQGGMFEDLRDESLAGLAELGFHGLAIGGLSVGEPKED HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHH MMRVLQHVGPKLPANKPHYLMGVGTPEDLVEGVANGIDMFDCVMPTRNARNGWLFTRFGD HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECC VKIRNATHKNSLKPLDSTCTCYTCQNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLQLMS EEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIRDAIETHTFDAFRQRFAEDRARGVD HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA