Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 107021797

GI number: 107021797

Start: 253352

End: 253675

Strand: Reverse

Name: yajC [H]

Synonym: Bcen_0237

Alternate gene names: 107021797

Gene position: 253675-253352 (Counterclockwise)

Preceding gene: 107021798

Following gene: 107021796

Centisome position: 7.7

GC content: 60.49

Gene sequence:

>324_bases
GTGCCGTTCATTTCCAATGCCTTCGCGCAAGGCGCCGGTGGCGCCGAATCGAGCCTGATGAGCTTCCTGCCGCTCATCCT
GATGTTCGCGGTGCTGTACTTCATCATGATCCGTCCGCAGATGAAGCGTCAGAAGGAACACCGCAACATGCTCGCGGCCA
TGGCGAAGGGCGACGAAGTCGTCACGAGCGGCGGCCTCGTCGGCAAGGTGACGAAGGTCACCGAAGGCTACATCGGCGTC
GAAATCGCCGAAGGCACCGAAATCACCGTGCAGAAGGCTGCCGTCACGACCATTCTGCCGAAGGGCACGATCAAGTCGCT
GTAA

Upstream 100 bases:

>100_bases
ACAGCTTGATCCGAAAGCGCATTTGCCGATCCGTTCGCGCAAGGGGCCGGTGGTAGAATAACCGGCTTATTTTTCGATCT
TCCCCTACGGAGAGACCAAC

Downstream 100 bases:

>100_bases
GGCTTTCACCGAGCGTCCGGCTCCCCGCGCCGTGCCCGCCTGAGAGAGCGGGCCGCCGCGGCGCCGGACGCGACGCTTTC
ACGCCAACCACCCGTTCGGC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPFISNAFAQGAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVTEGYIGV
EIAEGTEITVQKAAVTTILPKGTIKSL

Sequences:

>Translated_107_residues
MPFISNAFAQGAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVTEGYIGV
EIAEGTEITVQKAAVTTILPKGTIKSL
>Mature_106_residues
PFISNAFAQGAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEVVTSGGLVGKVTKVTEGYIGVE
IAEGTEITVQKAAVTTILPKGTIKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=107, Percent_Identity=46.7289719626168, Blast_Score=105, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11448; Mature: 11317

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFISNAFAQGAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEV
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
VTSGGLVGKVTKVTEGYIGVEIAEGTEITVQKAAVTTILPKGTIKSL
EECCCCHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PFISNAFAQGAGGAESSLMSFLPLILMFAVLYFIMIRPQMKRQKEHRNMLAAMAKGDEV
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEE
VTSGGLVGKVTKVTEGYIGVEIAEGTEITVQKAAVTTILPKGTIKSL
EECCCCHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]