| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021663
Identifier: 107021663
GI number: 107021663
Start: 107855
End: 108463
Strand: Reverse
Name: 107021663
Synonym: Bcen_0103
Alternate gene names: NA
Gene position: 108463-107855 (Counterclockwise)
Preceding gene: 107021664
Following gene: 107021658
Centisome position: 3.29
GC content: 62.23
Gene sequence:
>609_bases ATGACCGGGCGCGACCTTGGTGTCGCGCCCTTTTTTTACGAGGAATGCATATTGAAAGCGATTGCTCTCGCGCTCGCATC GATCGCCGCGATGGCCGCCCTGGCCGGCTGCGCGAACTCGAAAGCGCCGTCCAACAAGGACGACAGCGAGTTCGTGTACC TGCTCGATCGTCAGGGAACCTGGAAGGAAAACGCCGTCGACACGCTGCCGCCGCTGCCGCAAACGGGCGATCTGCTGCCG TTCAACGTGTCGCAGAACACGCCGCTCAAGTTCTTCGTCGATGCGAAGTCGCTCGAGGTCGGCACCGATGGCGTCGTGCG TTACGCAGTCGTCATCACGAGCCCGGCCGGTGCACGCAACGTGAACTACGAAGGCATCCGCTGCGACACCTACGAATGGC GCCAGTACGCCGGCCTGAACTCCGACCACAACGGCTGGGATCGCACGGTGGAAAACGACTGGCGGCGCATCGAGAACGGC GAGCTCAACGCCTACCACTCCGCGCTCTACCAGGACTACTTCTGCTCGAACAAGATGCCACAGGGCTCGACCCGGCAGAT TCTCGAAAACATCCGGTTCCACCGCACCGCGATGACGCAGTTGCGCTGA
Upstream 100 bases:
>100_bases GTCGACACATCGGTAGTCTGTTCGGAGATCGAAGTGGAAGCGAGCACGCTCGACGAGATGCCGCCCCACGTGATCGTCGG CAAATGACGAGTCGGACTGC
Downstream 100 bases:
>100_bases CGGCACGCGATGCGGGCCGCCCGCATCGTCCGCCGCACAAAAAAGCCCGCATCACGCGGGCTTTTTCATTTGAACGACGA AACCCGGCCGGCGATTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTGRDLGVAPFFYEECILKAIALALASIAAMAALAGCANSKAPSNKDDSEFVYLLDRQGTWKENAVDTLPPLPQTGDLLP FNVSQNTPLKFFVDAKSLEVGTDGVVRYAVVITSPAGARNVNYEGIRCDTYEWRQYAGLNSDHNGWDRTVENDWRRIENG ELNAYHSALYQDYFCSNKMPQGSTRQILENIRFHRTAMTQLR
Sequences:
>Translated_202_residues MTGRDLGVAPFFYEECILKAIALALASIAAMAALAGCANSKAPSNKDDSEFVYLLDRQGTWKENAVDTLPPLPQTGDLLP FNVSQNTPLKFFVDAKSLEVGTDGVVRYAVVITSPAGARNVNYEGIRCDTYEWRQYAGLNSDHNGWDRTVENDWRRIENG ELNAYHSALYQDYFCSNKMPQGSTRQILENIRFHRTAMTQLR >Mature_201_residues TGRDLGVAPFFYEECILKAIALALASIAAMAALAGCANSKAPSNKDDSEFVYLLDRQGTWKENAVDTLPPLPQTGDLLPF NVSQNTPLKFFVDAKSLEVGTDGVVRYAVVITSPAGARNVNYEGIRCDTYEWRQYAGLNSDHNGWDRTVENDWRRIENGE LNAYHSALYQDYFCSNKMPQGSTRQILENIRFHRTAMTQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22636; Mature: 22504
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRDLGVAPFFYEECILKAIALALASIAAMAALAGCANSKAPSNKDDSEFVYLLDRQGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC WKENAVDTLPPLPQTGDLLPFNVSQNTPLKFFVDAKSLEVGTDGVVRYAVVITSPAGARN CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEECCCCCEEEEEEEEECCCCCCC VNYEGIRCDTYEWRQYAGLNSDHNGWDRTVENDWRRIENGELNAYHSALYQDYFCSNKMP CCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC QGSTRQILENIRFHRTAMTQLR CCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGRDLGVAPFFYEECILKAIALALASIAAMAALAGCANSKAPSNKDDSEFVYLLDRQGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC WKENAVDTLPPLPQTGDLLPFNVSQNTPLKFFVDAKSLEVGTDGVVRYAVVITSPAGARN CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEECCCCCEEEEEEEEECCCCCCC VNYEGIRCDTYEWRQYAGLNSDHNGWDRTVENDWRRIENGELNAYHSALYQDYFCSNKMP CCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC QGSTRQILENIRFHRTAMTQLR CCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA