| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is gspO [H]
Identifier: 107021654
GI number: 107021654
Start: 98268
End: 99179
Strand: Reverse
Name: gspO [H]
Synonym: Bcen_0094
Alternate gene names: 107021654
Gene position: 99179-98268 (Counterclockwise)
Preceding gene: 107021655
Following gene: 107021653
Centisome position: 3.01
GC content: 70.07
Gene sequence:
>912_bases ATGACGCCAGTGCCCCTGTCCACCGTTTCCGATTCGCCCGAGGGCACGCTGCTCGCGCTGGCGATGCTGCCGCCCGCGCT GCAGTATGCGTTCGCGGTCGTCATCGGCCTTTGCATCGGCAGCTTCCTGAACGTGGTCGTGCACCGGTTGCCCGTGATGA TGCAGCGCGCGTGGCAGGCCGAGATCGCCGAAGCGACCGGCGCCGCGGGCGCCCCGCCCGACGACGGTTATCCGCCGCGC TACGATCTGTGGCGCCCGCGCAGCGCCTGCCCGCACTGCGGCCACGTGTTGCGCGCCTGGGAAAACATTCCGCTCCTTAG CTACCTGATGCTGCGCGGCCGCTGCCGGCGCTGCGGCCATGCAATCGGCATCCGCTATCCGCTCGTCGAACTCGCGTGCG CACTGCTCGCGGCCGGCTCGCTCGCGGCGTTCGGCCCGACCGTCGCCGCGTTCGCCGCGTTCGCGCTGTGCGCGGCGCTG CTCGCGATGAGTGCGATCGATATCCGGACCGGCTACCTGCCCGACTCGATGACGCTGCCATTGCTGTGGGCCGGGCTCGT GCTGAACCTCGGCGGCACTTTCACGTCGCTGCGCTCGGCCGTGATCGGCGCGATGGCCGGCTACCTGTTCCTGTGGTCGA TCTACTGGCTGTTCAAATGGCTGCGCGGCATCGAGGGCATCGGTTTCGGCGACCTGAAGCTGCTTGCCGCGCTCGGCGCA TGGATGGGCTGGGCCGCACTGCCGCAGGTCGTGCTGTTCGCGGCGGTGACCGGCGCGGTCGTCGGGCTCGTCGCGACCTG GCGCGGCCGCATGCGCTTCGAGGAGCCGATTCCATTCGGCCCGTTCCTCGCGGCCGGCGGCGTCGCCACGCTGTTTTTCG GCACCCCTTTCTATGCGGCGCTCGGAGGCTGA
Upstream 100 bases:
>100_bases GCGGCCTTGTGATCGCGATGTACCTGCCGATCCTTCAGCTCGGCAACGTGGTGTAGCATCGCAACCGATTCTGTCGCCTT TTAGTCCAACCTCGAGCCTC
Downstream 100 bases:
>100_bases CATGTTTTCAGTAGGACTCACGGGCGGCATCGGCAGCGGCAAGACGACCGTTGCCGACCTGTTCGGCGCCCGTGGCGCAT CGCTCGTCGATACCGACCTG
Product: prepilin peptidase
Products: NA
Alternate protein names: Leader peptidase; Prepilin peptidase; N-methyltransferase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTPVPLSTVSDSPEGTLLALAMLPPALQYAFAVVIGLCIGSFLNVVVHRLPVMMQRAWQAEIAEATGAAGAPPDDGYPPR YDLWRPRSACPHCGHVLRAWENIPLLSYLMLRGRCRRCGHAIGIRYPLVELACALLAAGSLAAFGPTVAAFAAFALCAAL LAMSAIDIRTGYLPDSMTLPLLWAGLVLNLGGTFTSLRSAVIGAMAGYLFLWSIYWLFKWLRGIEGIGFGDLKLLAALGA WMGWAALPQVVLFAAVTGAVVGLVATWRGRMRFEEPIPFGPFLAAGGVATLFFGTPFYAALGG
Sequences:
>Translated_303_residues MTPVPLSTVSDSPEGTLLALAMLPPALQYAFAVVIGLCIGSFLNVVVHRLPVMMQRAWQAEIAEATGAAGAPPDDGYPPR YDLWRPRSACPHCGHVLRAWENIPLLSYLMLRGRCRRCGHAIGIRYPLVELACALLAAGSLAAFGPTVAAFAAFALCAAL LAMSAIDIRTGYLPDSMTLPLLWAGLVLNLGGTFTSLRSAVIGAMAGYLFLWSIYWLFKWLRGIEGIGFGDLKLLAALGA WMGWAALPQVVLFAAVTGAVVGLVATWRGRMRFEEPIPFGPFLAAGGVATLFFGTPFYAALGG >Mature_302_residues TPVPLSTVSDSPEGTLLALAMLPPALQYAFAVVIGLCIGSFLNVVVHRLPVMMQRAWQAEIAEATGAAGAPPDDGYPPRY DLWRPRSACPHCGHVLRAWENIPLLSYLMLRGRCRRCGHAIGIRYPLVELACALLAAGSLAAFGPTVAAFAAFALCAALL AMSAIDIRTGYLPDSMTLPLLWAGLVLNLGGTFTSLRSAVIGAMAGYLFLWSIYWLFKWLRGIEGIGFGDLKLLAALGAW MGWAALPQVVLFAAVTGAVVGLVATWRGRMRFEEPIPFGPFLAAGGVATLFFGTPFYAALGG
Specific function: Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue [H]
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A24 family [H]
Homologues:
Organism=Escherichia coli, GI87082194, Length=274, Percent_Identity=37.5912408759124, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1789732, Length=148, Percent_Identity=45.2702702702703, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010627 - InterPro: IPR014032 - InterPro: IPR000045 [H]
Pfam domain/function: PF06750 DiS_P_DiS; PF01478 Peptidase_A24 [H]
EC number: =3.4.23.43 [H]
Molecular weight: Translated: 32228; Mature: 32096
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVPLSTVSDSPEGTLLALAMLPPALQYAFAVVIGLCIGSFLNVVVHRLPVMMQRAWQA CCCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIAEATGAAGAPPDDGYPPRYDLWRPRSACPHCGHVLRAWENIPLLSYLMLRGRCRRCGH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIGIRYPLVELACALLAAGSLAAFGPTVAAFAAFALCAALLAMSAIDIRTGYLPDSMTLP HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLWAGLVLNLGGTFTSLRSAVIGAMAGYLFLWSIYWLFKWLRGIEGIGFGDLKLLAALGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH WMGWAALPQVVLFAAVTGAVVGLVATWRGRMRFEEPIPFGPFLAAGGVATLFFGTPFYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHH LGG CCC >Mature Secondary Structure TPVPLSTVSDSPEGTLLALAMLPPALQYAFAVVIGLCIGSFLNVVVHRLPVMMQRAWQA CCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIAEATGAAGAPPDDGYPPRYDLWRPRSACPHCGHVLRAWENIPLLSYLMLRGRCRRCGH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIGIRYPLVELACALLAAGSLAAFGPTVAAFAAFALCAALLAMSAIDIRTGYLPDSMTLP HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LLWAGLVLNLGGTFTSLRSAVIGAMAGYLFLWSIYWLFKWLRGIEGIGFGDLKLLAALGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH WMGWAALPQVVLFAAVTGAVVGLVATWRGRMRFEEPIPFGPFLAAGGVATLFFGTPFYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHH LGG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10419967 [H]