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The map label for this gene is yvrE [H]

Identifier: 103488635

GI number: 103488635

Start: 3308629

End: 3309498

Strand: Direct

Name: yvrE [H]

Synonym: Sala_3160

Alternate gene names: 103488635

Gene position: 3308629-3309498 (Clockwise)

Preceding gene: 103488630

Following gene: 103488636

Centisome position: 98.91

GC content: 69.66

Gene sequence:

>870_bases
ATGGTCCAACTGCTCCTCGACGCCCGCGCATTGCTCGGCGAATCGCCCTTCTGGCACGCAGCCGAAGCGCGCCTCTACTG
GGTCGATATCGAGGGTTGCAAAATCCACCGCACCGATCCGGCGACGGGGACCGACGCGGTGATGGAACTCGCCGAACAGG
TCGGCTGCATCGCGCCGCGCGCGAACGGCGGCCTCGTCGCCGCGCTCGAAAATGGCTGCGCGCTCATCGACGACTGGGGC
GCCGCGCCGCGGCCCTTCGGCCCCCCGGTGCTGGCCGACAAGCCGCGCCAGCGCTTCAACGACGGCCGCGTCGATGCGGC
AGGGCGGCTGTGGGTCGGCAGCCTGACCAGCGACAAGCCGAAACGCGACGCGGCGCTGTACCGGCTCGATCCCGATGGCA
CCCTCACCGAAATCTTCGGCGGATTGATGACGAGCAACGGCGCGGCGTTCAGCCCCGACGGGCGCATCTTCTATCATGCC
GACACGCCGACGCACTCTATCCACGCCTATGACGTCGATCCGGCGACCGGCGCGCTGGGCGGCAAGCGGCTGTTCCATCG
CTTTGCCGAGGGCGAGGGCCGCCCCGACGGCGCCGCGGTCGATGCCGAGGGCTGCTATTGGTCGGCGCTGTGGGACGGCT
GGCGCGTCGTGCGCCTGTCGCCGGCGGGCGAATTGCTGCACACGGTCGACCTGCCGGTGCAGCGCCCGACGATGATCGCC
TTTGGCGGCGCCGACCTCAAAACCGCCTTCGTCACCAGCGCGGGCAAGAATCTGACCGATGCGGAGCGTGCGGGGCAGCC
GCACGCGGGGGGCGTCTTTATGTTCGACGTAGAGGTGCCGGGGCTCGCGCAGGAAATGTTCGCGGGGTAA

Upstream 100 bases:

>100_bases
TAAGAGACGTTCCGCGCCCTGCCGAAGACCCATGTTCTCAGCGCGCTGAATAGCTTTGCAACCGCTGGGCACCCTCGCCC
TCCCGCGCTAAGACTCGGCC

Downstream 100 bases:

>100_bases
ATATCCTCCCCATCGACTTGCGATGGGGAGGGGGACCGCCGCGAAGCGGTGGTGGAGGGGTCGCGAGCGTCAGCGAGCGC
TGCGCGCTCGACCCCTCGGT

Product: senescence marker protein-30 (SMP-30)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MVQLLLDARALLGESPFWHAAEARLYWVDIEGCKIHRTDPATGTDAVMELAEQVGCIAPRANGGLVAALENGCALIDDWG
AAPRPFGPPVLADKPRQRFNDGRVDAAGRLWVGSLTSDKPKRDAALYRLDPDGTLTEIFGGLMTSNGAAFSPDGRIFYHA
DTPTHSIHAYDVDPATGALGGKRLFHRFAEGEGRPDGAAVDAEGCYWSALWDGWRVVRLSPAGELLHTVDLPVQRPTMIA
FGGADLKTAFVTSAGKNLTDAERAGQPHAGGVFMFDVEVPGLAQEMFAG

Sequences:

>Translated_289_residues
MVQLLLDARALLGESPFWHAAEARLYWVDIEGCKIHRTDPATGTDAVMELAEQVGCIAPRANGGLVAALENGCALIDDWG
AAPRPFGPPVLADKPRQRFNDGRVDAAGRLWVGSLTSDKPKRDAALYRLDPDGTLTEIFGGLMTSNGAAFSPDGRIFYHA
DTPTHSIHAYDVDPATGALGGKRLFHRFAEGEGRPDGAAVDAEGCYWSALWDGWRVVRLSPAGELLHTVDLPVQRPTMIA
FGGADLKTAFVTSAGKNLTDAERAGQPHAGGVFMFDVEVPGLAQEMFAG
>Mature_289_residues
MVQLLLDARALLGESPFWHAAEARLYWVDIEGCKIHRTDPATGTDAVMELAEQVGCIAPRANGGLVAALENGCALIDDWG
AAPRPFGPPVLADKPRQRFNDGRVDAAGRLWVGSLTSDKPKRDAALYRLDPDGTLTEIFGGLMTSNGAAFSPDGRIFYHA
DTPTHSIHAYDVDPATGALGGKRLFHRFAEGEGRPDGAAVDAEGCYWSALWDGWRVVRLSPAGELLHTVDLPVQRPTMIA
FGGADLKTAFVTSAGKNLTDAERAGQPHAGGVFMFDVEVPGLAQEMFAG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=296, Percent_Identity=34.7972972972973, Blast_Score=168, Evalue=5e-42,
Organism=Homo sapiens, GI4759036, Length=296, Percent_Identity=34.7972972972973, Blast_Score=168, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24641471, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI18860103, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24641469, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45551448, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646912, Length=307, Percent_Identity=28.3387622149837, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24646910, Length=307, Percent_Identity=28.3387622149837, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 30866; Mature: 30866

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLLLDARALLGESPFWHAAEARLYWVDIEGCKIHRTDPATGTDAVMELAEQVGCIAPR
CEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCC
ANGGLVAALENGCALIDDWGAAPRPFGPPVLADKPRQRFNDGRVDAAGRLWVGSLTSDKP
CCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCC
KRDAALYRLDPDGTLTEIFGGLMTSNGAAFSPDGRIFYHADTPTHSIHAYDVDPATGALG
CCCCEEEEECCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCH
GKRLFHRFAEGEGRPDGAAVDAEGCYWSALWDGWRVVRLSPAGELLHTVDLPVQRPTMIA
HHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCCCEEEE
FGGADLKTAFVTSAGKNLTDAERAGQPHAGGVFMFDVEVPGLAQEMFAG
ECCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MVQLLLDARALLGESPFWHAAEARLYWVDIEGCKIHRTDPATGTDAVMELAEQVGCIAPR
CEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCC
ANGGLVAALENGCALIDDWGAAPRPFGPPVLADKPRQRFNDGRVDAAGRLWVGSLTSDKP
CCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCC
KRDAALYRLDPDGTLTEIFGGLMTSNGAAFSPDGRIFYHADTPTHSIHAYDVDPATGALG
CCCCEEEEECCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCCCH
GKRLFHRFAEGEGRPDGAAVDAEGCYWSALWDGWRVVRLSPAGELLHTVDLPVQRPTMIA
HHHHHHHHHCCCCCCCCCEECCCCCEEEEECCCEEEEEECCCCCEEEEECCCCCCCEEEE
FGGADLKTAFVTSAGKNLTDAERAGQPHAGGVFMFDVEVPGLAQEMFAG
ECCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]