Click here to switch to the map view.

The map label for this gene is crtI [H]

Identifier: 103488609

GI number: 103488609

Start: 3285510

End: 3286988

Strand: Reverse

Name: crtI [H]

Synonym: Sala_3134

Alternate gene names: 103488609

Gene position: 3286988-3285510 (Counterclockwise)

Preceding gene: 103488610

Following gene: 103488608

Centisome position: 98.26

GC content: 66.19

Gene sequence:

>1479_bases
ATGACCCGCACCGCCATCGTCATCGGCGCCGGTTTCGGCGGCCTCGCGCTTGCGATCCGGCTGCAATCGGCAGGGGTCGC
GACGACGATCGTCGAGGCGCGCGACAAGCCCGGCGGGCGCGCCTATCATTGGGTGCGCGACGGCTTCACCTTCGACGCCG
GGCCGACCGTCATCACCGATCCGCCCTGCCTCAGCGACCTGTGGGAATTGAGCGGGCAGGACATGGCCGCCGACGTCGAA
CTGATGCCCGTCAGTCCTTTCTACCGGCTCAACTGGCCCGACGGGACCAATTTCGACTATTCGAACGACGAGGCGGCGCT
CCACGCCGAGATCGCGCGGCTGAACCCCGCCGACGTCGCGGGTTACGAACGCTTCCTCGACTATTCGAAGGGCGTTTACG
AACAGGGCTATGTCAAGCTCGGCGCGACCGCCTTTCTCGACTTTCGGGCGATGATCAGGGCCGCGCCTGCGCTGATGAAA
TATCAGGCGTGGCGCAGCGTCTATTCGATCGTCTCCTCCTATGTGCAGGATGAGCGGCTGCGGCAGGCGCTGTCGTTCCA
CACCCTGCTCGTTGGCGGCAATCCGATGACGACGAGCGCCATCTATGCGCTGATCCACACGATCGAGAAGGACGGCGGCG
TCTGGTTCGCGCGCGGCGGCACCAACCGGCTGGTCGCCGCACTGATCCGCCTGTTCGAGCGGCTGGGCGGGACGCTGCGC
CTCGGCGATGCGGTGACGGCGATTCACACCGCGGGCGACCGCGCGACCGGGGTGACCACCGCGAGCGGCTGGCGCGGCGA
CGCCGAAATGATCGCGTGCAACGGCGACCTGATGCACGCCTACCGCGACCTGCTCGCCGATCATCCGCGCGGGCCGAAAA
CGGCGCGCAGCCTGGCGCGCAAACGCTGGTCGCCGTCGCTGTTCGTCGTGCATTTCGGCGCGAAGGGCGACTATCCCGGT
GTCGCGCACCACAGCATCTTGTTCGGCCCGCGGTATAAAGGGCTGCTCGACGACATCTACAAGAACGGCGTCGTGCCGGA
CGATTTCTCGCTCTACCTCCACCATCCCAGCATCACCGATCCGGGCATGGCGCCGCCGGGGCATTCGACCTTTTACGCGC
TTGCCCCCGTCGCGCACCTCGGCAAGGCGAAAGCCGACTGGGACGGCGATTTCGGCACGCGCTTCGCCGATGCGATCATC
GACGAGGTCGAACGGCGCGTCGCACCCGATCTTCGCGCCAATATCGTCACGCGCTTTCACTATACGCCGACCGATTTCGG
TCGCGACCTCAATGCGCACCTCGGCAGCGCGTTCAGCCTCGAACCCGTGCTGTGGCAGTCGGCCTTTTTCCGCGCGCACA
ACCGCGACGACAGGATTTCCAATCTTTACTTCGTCGGCGCGGGAACGCATCCGGGCGCGGGAATCCCAGGCGTCGTCGGC
AGCGCCAAGGCAACGGCGGCGTTGATGCTGGACTTGTAA

Upstream 100 bases:

>100_bases
CCGGGCGGTCGACCGCGGCGGACCGGCTGCGCCTGCTTGCGGGAAAGCCGCCGGTGCCGGTCGGCCGCGCGCTGTCGGCG
CTTGCAAAACTGGATTGGAA

Downstream 100 bases:

>100_bases
TTCCGCTCACATCATCGAGCGGGTAAGGGAAGACTATGAAACGCCTCGCCGTCTATTGCGGGTCCGCGACCCCCGATGAC
CCCGTCTATATCGAAACCGC

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTRTAIVIGAGFGGLALAIRLQSAGVATTIVEARDKPGGRAYHWVRDGFTFDAGPTVITDPPCLSDLWELSGQDMAADVE
LMPVSPFYRLNWPDGTNFDYSNDEAALHAEIARLNPADVAGYERFLDYSKGVYEQGYVKLGATAFLDFRAMIRAAPALMK
YQAWRSVYSIVSSYVQDERLRQALSFHTLLVGGNPMTTSAIYALIHTIEKDGGVWFARGGTNRLVAALIRLFERLGGTLR
LGDAVTAIHTAGDRATGVTTASGWRGDAEMIACNGDLMHAYRDLLADHPRGPKTARSLARKRWSPSLFVVHFGAKGDYPG
VAHHSILFGPRYKGLLDDIYKNGVVPDDFSLYLHHPSITDPGMAPPGHSTFYALAPVAHLGKAKADWDGDFGTRFADAII
DEVERRVAPDLRANIVTRFHYTPTDFGRDLNAHLGSAFSLEPVLWQSAFFRAHNRDDRISNLYFVGAGTHPGAGIPGVVG
SAKATAALMLDL

Sequences:

>Translated_492_residues
MTRTAIVIGAGFGGLALAIRLQSAGVATTIVEARDKPGGRAYHWVRDGFTFDAGPTVITDPPCLSDLWELSGQDMAADVE
LMPVSPFYRLNWPDGTNFDYSNDEAALHAEIARLNPADVAGYERFLDYSKGVYEQGYVKLGATAFLDFRAMIRAAPALMK
YQAWRSVYSIVSSYVQDERLRQALSFHTLLVGGNPMTTSAIYALIHTIEKDGGVWFARGGTNRLVAALIRLFERLGGTLR
LGDAVTAIHTAGDRATGVTTASGWRGDAEMIACNGDLMHAYRDLLADHPRGPKTARSLARKRWSPSLFVVHFGAKGDYPG
VAHHSILFGPRYKGLLDDIYKNGVVPDDFSLYLHHPSITDPGMAPPGHSTFYALAPVAHLGKAKADWDGDFGTRFADAII
DEVERRVAPDLRANIVTRFHYTPTDFGRDLNAHLGSAFSLEPVLWQSAFFRAHNRDDRISNLYFVGAGTHPGAGIPGVVG
SAKATAALMLDL
>Mature_491_residues
TRTAIVIGAGFGGLALAIRLQSAGVATTIVEARDKPGGRAYHWVRDGFTFDAGPTVITDPPCLSDLWELSGQDMAADVEL
MPVSPFYRLNWPDGTNFDYSNDEAALHAEIARLNPADVAGYERFLDYSKGVYEQGYVKLGATAFLDFRAMIRAAPALMKY
QAWRSVYSIVSSYVQDERLRQALSFHTLLVGGNPMTTSAIYALIHTIEKDGGVWFARGGTNRLVAALIRLFERLGGTLRL
GDAVTAIHTAGDRATGVTTASGWRGDAEMIACNGDLMHAYRDLLADHPRGPKTARSLARKRWSPSLFVVHFGAKGDYPGV
AHHSILFGPRYKGLLDDIYKNGVVPDDFSLYLHHPSITDPGMAPPGHSTFYALAPVAHLGKAKADWDGDFGTRFADAIID
EVERRVAPDLRANIVTRFHYTPTDFGRDLNAHLGSAFSLEPVLWQSAFFRAHNRDDRISNLYFVGAGTHPGAGIPGVVGS
AKATAALMLDL

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 53569; Mature: 53438

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTAIVIGAGFGGLALAIRLQSAGVATTIVEARDKPGGRAYHWVRDGFTFDAGPTVITD
CCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCEEECCCCEEEEC
PPCLSDLWELSGQDMAADVELMPVSPFYRLNWPDGTNFDYSNDEAALHAEIARLNPADVA
CCHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHH
GYERFLDYSKGVYEQGYVKLGATAFLDFRAMIRAAPALMKYQAWRSVYSIVSSYVQDERL
HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQALSFHTLLVGGNPMTTSAIYALIHTIEKDGGVWFARGGTNRLVAALIRLFERLGGTLR
HHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEE
LGDAVTAIHTAGDRATGVTTASGWRGDAEMIACNGDLMHAYRDLLADHPRGPKTARSLAR
ECCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
KRWSPSLFVVHFGAKGDYPGVAHHSILFGPRYKGLLDDIYKNGVVPDDFSLYLHHPSITD
HCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
PGMAPPGHSTFYALAPVAHLGKAKADWDGDFGTRFADAIIDEVERRVAPDLRANIVTRFH
CCCCCCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEEE
YTPTDFGRDLNAHLGSAFSLEPVLWQSAFFRAHNRDDRISNLYFVGAGTHPGAGIPGVVG
CCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC
SAKATAALMLDL
CCCCEEEEEEEC
>Mature Secondary Structure 
TRTAIVIGAGFGGLALAIRLQSAGVATTIVEARDKPGGRAYHWVRDGFTFDAGPTVITD
CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCEEECCCCEEEEC
PPCLSDLWELSGQDMAADVELMPVSPFYRLNWPDGTNFDYSNDEAALHAEIARLNPADVA
CCHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHH
GYERFLDYSKGVYEQGYVKLGATAFLDFRAMIRAAPALMKYQAWRSVYSIVSSYVQDERL
HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQALSFHTLLVGGNPMTTSAIYALIHTIEKDGGVWFARGGTNRLVAALIRLFERLGGTLR
HHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEE
LGDAVTAIHTAGDRATGVTTASGWRGDAEMIACNGDLMHAYRDLLADHPRGPKTARSLAR
ECCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
KRWSPSLFVVHFGAKGDYPGVAHHSILFGPRYKGLLDDIYKNGVVPDDFSLYLHHPSITD
HCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
PGMAPPGHSTFYALAPVAHLGKAKADWDGDFGTRFADAIIDEVERRVAPDLRANIVTRFH
CCCCCCCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEEE
YTPTDFGRDLNAHLGSAFSLEPVLWQSAFFRAHNRDDRISNLYFVGAGTHPGAGIPGVVG
CCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCC
SAKATAALMLDL
CCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]