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The map label for this gene is crtY [H]

Identifier: 103488610

GI number: 103488610

Start: 3286985

End: 3288142

Strand: Reverse

Name: crtY [H]

Synonym: Sala_3135

Alternate gene names: 103488610

Gene position: 3288142-3286985 (Counterclockwise)

Preceding gene: 103488616

Following gene: 103488609

Centisome position: 98.3

GC content: 67.96

Gene sequence:

>1158_bases
ATGGTGGGGCCGAACATCGATAAATGCGACATCGCGATCGTCGGCGGCGGGCTTGCGGGCGGACTTGCGGCGCTGGCGCT
GGCGGCCAAGCGGCCCGATCTCGACATACGACTGATCGAGCCGGGGCCGGTCGGGGGCAATCATATCTGGTCCTTTTTCG
ACAGCGACATCGCAAAGAAGGACCGCTGGCTCGTCGCGCCGCTCGTCCGCCACCACTGGCCGCGCTATGACGTGCGCTTT
CCCGCGCACGCGCGGACGCTGCACATGGGATATAAAAGCATCACCGGCGAAGCGCTGGCCGAAGCGGTGGCGGCGGCGCT
GCCGGACGGCCATATCATCGCCGATCGCGCGAAACATGTCGCGCCCGACCATCTGCTGCTGGCGCGCGGCGGGCGATTGT
CGGCGAAGCATGTCCTCGACGCGCGCGGCGCGGGCAAGTTTCCGACACTGGACTGCGGCTGGCAGAAGTTTGTCGGGCAG
GCGCTCACCGTGAAGGGCGGGCACGGCGTCGAACAGCCGGTGGTGATGGACGCGACGGTGGAGCAATTGGACGGCTATCG
CTTTGTCTATCTCCTCCCCTTCGACGCCGAAACCCTGTTCGTCGAGGACACCTATTACAGCGACGACGCCGACCTCGACG
AAATGGTGGTGCGCGAACGCATTGCCGCCTATGCCGCGGCGCAGGGCTGGCAGGTGACGGCGACGATGCGCGAGGAGAGC
GGCGTGTTACCAGTGGTGATCGCGGGCGATTTCGACCGGTTGTGGCCGGAATCGGACCGCACGTCACGAATCGGCGTGCG
CGCAGGGATGTTCCACGCGACGACGGGTTATTCGCTGCCGCACGCCGTACGCACCGCGGCGGCGCTGCCCGCGCTGGTCG
GTCGCGCCGACCTGCCCGCGCTGCTGCGCGCGCGCGCGCAGTCGGCGTGGCGGCGCCAGCGCTTTTACCGGATGCTGGAC
GCCATGCTGTTCCGCGCCGCCGATCCCGATAGGCGTTACCGCATTTTCGAGCGATTCTATCGCCTGTCGCCGCGGCTCGT
CGCGCGCTTCTATGCCGGGCGGTCGACCGCGGCGGACCGGCTGCGCCTGCTTGCGGGAAAGCCGCCGGTGCCGGTCGGCC
GCGCGCTGTCGGCGCTTGCAAAACTGGATTGGAAATGA

Upstream 100 bases:

>100_bases
GGACAAAAGGATCGCCCAGCCGGTCATGGCGGGAGGCTAGCCGTTCGGCGGCGCGTTGCAATGGCTTTGCACGGGCGCGA
AGCGCGGCTAGGGCGGAGAC

Downstream 100 bases:

>100_bases
CCCGCACCGCCATCGTCATCGGCGCCGGTTTCGGCGGCCTCGCGCTTGCGATCCGGCTGCAATCGGCAGGGGTCGCGACG
ACGATCGTCGAGGCGCGCGA

Product: lycopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKKDRWLVAPLVRHHWPRYDVRF
PAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHVAPDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQ
ALTVKGGHGVEQPVVMDATVEQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPALLRARAQSAWRRQRFYRMLD
AMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADRLRLLAGKPPVPVGRALSALAKLDWK

Sequences:

>Translated_385_residues
MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKKDRWLVAPLVRHHWPRYDVRF
PAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHVAPDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQ
ALTVKGGHGVEQPVVMDATVEQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPALLRARAQSAWRRQRFYRMLD
AMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADRLRLLAGKPPVPVGRALSALAKLDWK
>Mature_385_residues
MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKKDRWLVAPLVRHHWPRYDVRF
PAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHVAPDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQ
ALTVKGGHGVEQPVVMDATVEQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPALLRARAQSAWRRQRFYRMLD
AMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADRLRLLAGKPPVPVGRALSALAKLDWK

Specific function: Catalyzes the cyclization reaction which converts lycopene to beta-carotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008461
- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 42448; Mature: 42448

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKK
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC
DRWLVAPLVRHHWPRYDVRFPAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHV
CCEEEEHHHHCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHC
APDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQALTVKGGHGVEQPVVMDATV
CCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEHHHH
EQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
HHHCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPA
CCEEEEEECCCHHHCCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
LLRARAQSAWRRQRFYRMLDAMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH
LRLLAGKPPVPVGRALSALAKLDWK
HHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKK
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC
DRWLVAPLVRHHWPRYDVRFPAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHV
CCEEEEHHHHCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHC
APDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQALTVKGGHGVEQPVVMDATV
CCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEHHHH
EQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
HHHCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPA
CCEEEEEECCCHHHCCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH
LLRARAQSAWRRQRFYRMLDAMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH
LRLLAGKPPVPVGRALSALAKLDWK
HHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]