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The map label for this gene is cirA [C]

Identifier: 103488600

GI number: 103488600

Start: 3277319

End: 3279676

Strand: Direct

Name: cirA [C]

Synonym: Sala_3125

Alternate gene names: 103488600

Gene position: 3277319-3279676 (Clockwise)

Preceding gene: 103488597

Following gene: 103488601

Centisome position: 97.97

GC content: 62.04

Gene sequence:

>2358_bases
ATGATTCGAACTTTCAGCCTGCGTTCCGCCGCCGCTCTCGCCATCGTCGCGGTGCTCGCCACCGCTCCCGCTGTCGCGCA
GCCGACATCCGCCGACACGGCGCCGATCCAGCGCGACGAGGGCGACATCACGACCTCGCAGGACATCGTCGTCCTCGGCA
GCGTCGGCTATCGGGGCCGCAGCGACGAGGCCGAACCCGTCCTTTCATATGACAGCGAGTTTTTCCAGCGCTTCGAGCCG
CTGACCGCAGGCGATGCGCTGAAGCGCGTGCCGTCCGTCACCTTTCTGTCCGACGTCATCGAAAGCGACGGTGCGCGCCT
TCGCGGCCTGCCGCCGGGCTATACGCAGATCCTGATCAACGGCGAGCGCGTCCCCGGCAACGGCGACGACCGCAGCTTTT
TCATGGATCGCATTCCCGCCGAACTGATCGACCGCGTCGAGATCCTCCGCTCCTCGTCGGCGCGCCGCACAGGCGATGCC
GTCGCGGGCACGATCAACATCGAACTGCGCGACGGTTTTGAACTCGATGGCGGCTATGTCCGCGCGGGCGCGCTCTATTT
CGACGATGAGGAACTCGAACCAAGCCTCGGCCTCGTCTATGGCGGGAAAGTCGGGCCGGGCCGCCTGCTCGTCGGGCTCA
ATTTTCAGGGTCGCCACAATCCGAAGCGGAAGCGTTCGCTGCGCTATGGCGATTCCCCCGAGAACGATCCCGATTTCCGG
GTCAACGAGTTCGACAATCGCGAGGACCAGAGCGACACGCGCGACGGCAAGGATTATTCGGCCAACGCCAGCTATGAGAT
CGACGGCGAGACCACCGGTTTCCGGATCAGCGGCTTCTACGTCCGCACCGACCGCACGGAGACCGAGCGCAGCTTCGAAT
ATGACGATCCGACGGCGATCAGTGGCCCGCTGCCCAGCGGCAATCTGTTGACCGACAATCGCAACGTTAACAATATCGAT
CAGGAAAATTACAGCATCGACGCCAGATTGTCGCACGATTGGTCGCTCGGCAAGACGACGCTGCGTCTCGGCCATGCGCG
GTTCGACGACAAGCAGCGCGAGAGCGAGAATGAGATCGATTTCGACGTCGATTATGACGATGGCGAAGTGCCGGTGTTCG
AACAGGCGTTCACTGCGACCGACATCGTCGACAAGGAATACACCGCCAAGCTCGACCATGAGTTCGACCTTGGTCACGAC
ATCCAGCTTGTGGTCGGCGGCTTCTATCAGAAGAAAAAGCGGAATACCGCGATCCTCGACGCGGACGGCGAAGAGGATTT
TCCGGGGCTCGAAACCAGCTATGACCAGTTCGCCGATAGTCCCGACGACCTGCTTTCGCCCTTCGACCCGCTCGAGCCGA
CCGATGGCGGGGTCAGCCGGATCGAGGAACGACGTCTCGACGGTTTCGCGCTGGTGCAGGGCAAATCGGGCGGGCTGACG
TGGGAGGCGGGCATCCGCTATGAAACCACGCGCTTCGACATCACCGACTTCACCGAAGCGGCAGCGATTCCCACGCAGCG
CAATGAATATGAAAAATGGCTGCCGTCGGCGTCGGTCAAGTTCGACCTGACCTCGCGCGACCGCATCACCGCGTCGGTCG
CGCGCACCAACCGTCGCCCCGATTTCAACTTCATCTCGCCCGCCCTGCTCGAAGAAGAAGTCGGCGACAGCGACCTGCTC
GGCAATCCGCAACTCGGTCCCGAAACCGCCTGGGGTTTCGATCTGGGGTATGAGCGCCGCATCGGTCGCACCGGCATCGT
CGGGATCAATGCCTTCTACCGCGACGTGACCGACCTCATCGAACTGACCAACACCGGCGAAGAGGGGTCGGAAGGCGAGG
GCACTTTCGTCTACCAGCCGCAGAATGTCGGCGACGGCAAGGTGTGGGGCGTCGAGTTCGATCTTTCGACCGACCTCGGT
TTCCTCGGCCTGCCCGACACGGGCCTTTTCGGCAACGTCTCGTGGCTCGACAGCGAGATCACCGATTTTGCGGGCAAGCG
CCGCTTCAACGGCCAGTCGGACTATGTCTACAACATCGGCTTCGTTCAGGACATCCCGCGCTGGGGCGTTGCTTTCGGCG
CGACGCACCGCAAACAGGGCGCGGCCTATGACCGTGTGATCAGCGAGGAAGTGCGCACGACCTATGGCGCCGACCTTGAA
ATCTTCGTCGAAAAGCGGATCGGCAGCAATTTCACGATCCGCGCGGTCGGATCGAACCTGTTGAACGGAGCCAAGCGCGA
AGTGTTCAACAAGTTCGACAATCTCGAAGACCAGCAGACACGCGATTTCGACGAATATGAGCTCGAAAGCGAAAAGGCGG
GGCCAGTGTTCCAGCTGATGGCGCGCTACGCCTTTTAG

Upstream 100 bases:

>100_bases
TTTCAGTCATATAAACGTCATCGAAACGTCATTTGACTCGCCGCAAACGGTCACATGGCGCCCCTAGACGCCCGGCAACC
ACAAAGGGGGTCTAACCAAA

Downstream 100 bases:

>100_bases
AGCGCGATGACATGATATTGACCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGCAGGACGGGCTGGT
TGCCCGGACCAGAGACGCGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; Nb-Dependent Receptor; Siderophore Receptor Protein; NB-Dependent Receptor Subfamily; NB-Denpendent Receptor

Number of amino acids: Translated: 785; Mature: 785

Protein sequence:

>785_residues
MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGRSDEAEPVLSYDSEFFQRFEP
LTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILINGERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDA
VAGTINIELRDGFELDGGYVRAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAISGPLPSGNLLTDNRNVNNID
QENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEIDFDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHD
IQLVVGGFYQKKKRNTAILDADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRPDFNFISPALLEEEVGDSDLL
GNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLIELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLG
FLGLPDTGLFGNVSWLDSEITDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLMARYAF

Sequences:

>Translated_785_residues
MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGRSDEAEPVLSYDSEFFQRFEP
LTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILINGERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDA
VAGTINIELRDGFELDGGYVRAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAISGPLPSGNLLTDNRNVNNID
QENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEIDFDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHD
IQLVVGGFYQKKKRNTAILDADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRPDFNFISPALLEEEVGDSDLL
GNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLIELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLG
FLGLPDTGLFGNVSWLDSEITDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLMARYAF
>Mature_785_residues
MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGRSDEAEPVLSYDSEFFQRFEP
LTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILINGERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDA
VAGTINIELRDGFELDGGYVRAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAISGPLPSGNLLTDNRNVNNID
QENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEIDFDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHD
IQLVVGGFYQKKKRNTAILDADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRPDFNFISPALLEEEVGDSDLL
GNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLIELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLG
FLGLPDTGLFGNVSWLDSEITDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLMARYAF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87433; Mature: 87433

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGR
CCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
SDEAEPVLSYDSEFFQRFEPLTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILIN
CCCCCCHHHCCHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCEECCCCCCCEEEEEE
GERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDAVAGTINIELRDGFELDGGYV
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEECCCEE
RAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
EEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCE
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAI
ECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCHHCCCCCCCCCCC
SGPLPSGNLLTDNRNVNNIDQENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEID
CCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCCCHHHCCCCCCE
FDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHDIQLVVGGFYQKKKRNTAILD
EEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCEEEE
ADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEE
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRP
EECCCEEEEEEECCCCCHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC
DFNFISPALLEEEVGDSDLLGNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLI
CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHH
ELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLGFLGLPDTGLFGNVSWLDSEI
HHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHH
TDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
HHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLM
EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCHHHHHH
ARYAF
HHHCC
>Mature Secondary Structure
MIRTFSLRSAAALAIVAVLATAPAVAQPTSADTAPIQRDEGDITTSQDIVVLGSVGYRGR
CCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
SDEAEPVLSYDSEFFQRFEPLTAGDALKRVPSVTFLSDVIESDGARLRGLPPGYTQILIN
CCCCCCHHHCCHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCEECCCCCCCEEEEEE
GERVPGNGDDRSFFMDRIPAELIDRVEILRSSSARRTGDAVAGTINIELRDGFELDGGYV
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEECCCEE
RAGALYFDDEELEPSLGLVYGGKVGPGRLLVGLNFQGRHNPKRKRSLRYGDSPENDPDFR
EEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCE
VNEFDNREDQSDTRDGKDYSANASYEIDGETTGFRISGFYVRTDRTETERSFEYDDPTAI
ECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCHHCCCCCCCCCCC
SGPLPSGNLLTDNRNVNNIDQENYSIDARLSHDWSLGKTTLRLGHARFDDKQRESENEID
CCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCCCHHHCCCCCCE
FDVDYDDGEVPVFEQAFTATDIVDKEYTAKLDHEFDLGHDIQLVVGGFYQKKKRNTAILD
EEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCEEEE
ADGEEDFPGLETSYDQFADSPDDLLSPFDPLEPTDGGVSRIEERRLDGFALVQGKSGGLT
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEE
WEAGIRYETTRFDITDFTEAAAIPTQRNEYEKWLPSASVKFDLTSRDRITASVARTNRRP
EECCCEEEEEEECCCCCHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC
DFNFISPALLEEEVGDSDLLGNPQLGPETAWGFDLGYERRIGRTGIVGINAFYRDVTDLI
CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEHHHHHHHHHHHH
ELTNTGEEGSEGEGTFVYQPQNVGDGKVWGVEFDLSTDLGFLGLPDTGLFGNVSWLDSEI
HHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHH
TDFAGKRRFNGQSDYVYNIGFVQDIPRWGVAFGATHRKQGAAYDRVISEEVRTTYGADLE
HHHHHCCCCCCCCCEEEECCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEE
IFVEKRIGSNFTIRAVGSNLLNGAKREVFNKFDNLEDQQTRDFDEYELESEKAGPVFQLM
EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCHHHHHH
ARYAF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA