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The map label for this gene is ytfL [C]

Identifier: 103488578

GI number: 103488578

Start: 3249956

End: 3251356

Strand: Direct

Name: ytfL [C]

Synonym: Sala_3102

Alternate gene names: 103488578

Gene position: 3249956-3251356 (Clockwise)

Preceding gene: 103488575

Following gene: 103488581

Centisome position: 97.15

GC content: 67.31

Gene sequence:

>1401_bases
ATGCTGCGCCTTTCGCCTATAGGGAGGCATGACCGAAGCCGACAGGGGCCGGGCGCCGCCGCGCCGCATCACCGCCCGAT
GACCCCTTTTCCCTGGTCCGACGTCGCGATCATCGCGATTCTCGTCCTTCTCAACGGCCTGTTCGCGATGTCCGAACTGG
CGATCGTCTCGGCGCGGCAGCCGCGGTTGCAGGCAGCCGAAAAGCGCGGCAGCCGCGGCGCGAAGATCGCGCGCCAGCTC
GCGTCCGACCCCGGCCGCTTCCTGTCGACGGTGCAGGTCGGCATCACGCTGATCGGGATTCTCGCCGGCGCCTATTCGGG
CGCCAGCCTGGGCGCGCCGGTCGCGGAGCGTTTGCAGGCCTGGATAGGACTCGACGACGAAACGGCGCTGACCGCGGGCT
TTGCCGTAGTCATCGCACTCACGACCTATGCCTCGCTGATTGCTGGCGAGCTCGTGCCCAAGCAGTTTGCTTTGCGTGCG
CCCGAACCGATCGCCATTTTCATCGCCTTGCCGATGCTGTGGCTGTCGAAAATCGGTGCGCCGCTGGTGTGGCTGCTCGA
CCGCAGCTCGGCGCTGGTATTTCGCCTGCTCGGGCTGAGACGTGAATCGGAGGAGCGAGTGACCGCCGAGGAGCTGCACC
TGATCGTCGCCGAAGCGTCGAAATCGGGGGTGATCGAGGAAAGCGAGCGGGCGATCATTTCGGGCGTCGTGCGCCTCGCC
GACCGGCCGGTGCGCGAGGTGATGACGCCGCGCAAGGATGTCGACTGGATCGACATTTCGCTCGATGCGCGCGGCCTGCG
CGACAGGCTGCTCGAAACGCCGCACAGCCGCCTGCCGGTCGCGCGCGGGTCGGTCGACGAGATCGTCGGCGTGGTACAGG
CGCGCGACATCGCCGCGGCGCTGTTCGCCGGGCAGACGCTGGACCTGGAAAAGCTGATGCGCCCCGCGAAGGTCATCCAC
GACCAGCTCGACGCGATGGACGCGCTCGAAGCCTTGCGCGCGGCCGAGGTGCCGATGCTGCTGGTCCACGACGAATATGG
CCACTTCGACGGGCTGGTGACGCCCGCCGATCTGCTTTCGGCGATTGCGGGCGAATTTGCGTCGGACCAGGACATCGGCA
GCGATCCCTATGTGGTCGAGCGCGACGACGGCAGCCTGCTGATCGCGGGAGCGATGCCCGCCGACCAGATGGCCGAGCGG
CTGGGGATCGAATTGCCCGGTGACCGCGACTATGCCACCGCCGCGGGCCACGCGCTCGCGGTGCTCAAGCATTTGCCTGT
GGAAGGCGAAAGCTTCACCGACCGGGGCTGGAAGTTCGAGATCGTCGACATGGACGGACGCAAGATCGACAAGCTGCTCG
TCAGCGACGTCCGCAAGCCGAAGGGCGCCGAGGCCGAATAG

Upstream 100 bases:

>100_bases
CACGCGCCGGTACTTGCCGATAACATATGGCCAGCGTTCTGGTTCCAGACCATGACTGAATAGTGGCTGAGCGGACCGTT
TGGCGACGCGCCATTGTGCA

Downstream 100 bases:

>100_bases
GCGCCGCTCTAAGGCTCTCCGCTCAGCGCGCCATATTTCGCCTCGAACCCGGCCTTGTCGCCGCGCGCGAGATAGCTGGC
CTGGTCGATCAGGTTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MLRLSPIGRHDRSRQGPGAAAPHHRPMTPFPWSDVAIIAILVLLNGLFAMSELAIVSARQPRLQAAEKRGSRGAKIARQL
ASDPGRFLSTVQVGITLIGILAGAYSGASLGAPVAERLQAWIGLDDETALTAGFAVVIALTTYASLIAGELVPKQFALRA
PEPIAIFIALPMLWLSKIGAPLVWLLDRSSALVFRLLGLRRESEERVTAEELHLIVAEASKSGVIEESERAIISGVVRLA
DRPVREVMTPRKDVDWIDISLDARGLRDRLLETPHSRLPVARGSVDEIVGVVQARDIAAALFAGQTLDLEKLMRPAKVIH
DQLDAMDALEALRAAEVPMLLVHDEYGHFDGLVTPADLLSAIAGEFASDQDIGSDPYVVERDDGSLLIAGAMPADQMAER
LGIELPGDRDYATAAGHALAVLKHLPVEGESFTDRGWKFEIVDMDGRKIDKLLVSDVRKPKGAEAE

Sequences:

>Translated_466_residues
MLRLSPIGRHDRSRQGPGAAAPHHRPMTPFPWSDVAIIAILVLLNGLFAMSELAIVSARQPRLQAAEKRGSRGAKIARQL
ASDPGRFLSTVQVGITLIGILAGAYSGASLGAPVAERLQAWIGLDDETALTAGFAVVIALTTYASLIAGELVPKQFALRA
PEPIAIFIALPMLWLSKIGAPLVWLLDRSSALVFRLLGLRRESEERVTAEELHLIVAEASKSGVIEESERAIISGVVRLA
DRPVREVMTPRKDVDWIDISLDARGLRDRLLETPHSRLPVARGSVDEIVGVVQARDIAAALFAGQTLDLEKLMRPAKVIH
DQLDAMDALEALRAAEVPMLLVHDEYGHFDGLVTPADLLSAIAGEFASDQDIGSDPYVVERDDGSLLIAGAMPADQMAER
LGIELPGDRDYATAAGHALAVLKHLPVEGESFTDRGWKFEIVDMDGRKIDKLLVSDVRKPKGAEAE
>Mature_466_residues
MLRLSPIGRHDRSRQGPGAAAPHHRPMTPFPWSDVAIIAILVLLNGLFAMSELAIVSARQPRLQAAEKRGSRGAKIARQL
ASDPGRFLSTVQVGITLIGILAGAYSGASLGAPVAERLQAWIGLDDETALTAGFAVVIALTTYASLIAGELVPKQFALRA
PEPIAIFIALPMLWLSKIGAPLVWLLDRSSALVFRLLGLRRESEERVTAEELHLIVAEASKSGVIEESERAIISGVVRLA
DRPVREVMTPRKDVDWIDISLDARGLRDRLLETPHSRLPVARGSVDEIVGVVQARDIAAALFAGQTLDLEKLMRPAKVIH
DQLDAMDALEALRAAEVPMLLVHDEYGHFDGLVTPADLLSAIAGEFASDQDIGSDPYVVERDDGSLLIAGAMPADQMAER
LGIELPGDRDYATAAGHALAVLKHLPVEGESFTDRGWKFEIVDMDGRKIDKLLVSDVRKPKGAEAE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=391, Percent_Identity=25.8312020460358, Blast_Score=158, Evalue=1e-38,
Organism=Escherichia coli, GI1790664, Length=428, Percent_Identity=27.803738317757, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI145693175, Length=424, Percent_Identity=27.5943396226415, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1788119, Length=265, Percent_Identity=33.2075471698113, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI87082033, Length=284, Percent_Identity=28.169014084507, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1786879, Length=241, Percent_Identity=26.1410788381743, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50309; Mature: 50309

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSPIGRHDRSRQGPGAAAPHHRPMTPFPWSDVAIIAILVLLNGLFAMSELAIVSARQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRLQAAEKRGSRGAKIARQLASDPGRFLSTVQVGITLIGILAGAYSGASLGAPVAERLQA
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
WIGLDDETALTAGFAVVIALTTYASLIAGELVPKQFALRAPEPIAIFIALPMLWLSKIGA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PLVWLLDRSSALVFRLLGLRRESEERVTAEELHLIVAEASKSGVIEESERAIISGVVRLA
CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHH
DRPVREVMTPRKDVDWIDISLDARGLRDRLLETPHSRLPVARGSVDEIVGVVQARDIAAA
CCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHH
LFAGQTLDLEKLMRPAKVIHDQLDAMDALEALRAAEVPMLLVHDEYGHFDGLVTPADLLS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHH
AIAGEFASDQDIGSDPYVVERDDGSLLIAGAMPADQMAERLGIELPGDRDYATAAGHALA
HHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLKHLPVEGESFTDRGWKFEIVDMDGRKIDKLLVSDVRKPKGAEAE
HHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRLSPIGRHDRSRQGPGAAAPHHRPMTPFPWSDVAIIAILVLLNGLFAMSELAIVSARQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRLQAAEKRGSRGAKIARQLASDPGRFLSTVQVGITLIGILAGAYSGASLGAPVAERLQA
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
WIGLDDETALTAGFAVVIALTTYASLIAGELVPKQFALRAPEPIAIFIALPMLWLSKIGA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PLVWLLDRSSALVFRLLGLRRESEERVTAEELHLIVAEASKSGVIEESERAIISGVVRLA
CEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHH
DRPVREVMTPRKDVDWIDISLDARGLRDRLLETPHSRLPVARGSVDEIVGVVQARDIAAA
CCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHH
LFAGQTLDLEKLMRPAKVIHDQLDAMDALEALRAAEVPMLLVHDEYGHFDGLVTPADLLS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHH
AIAGEFASDQDIGSDPYVVERDDGSLLIAGAMPADQMAERLGIELPGDRDYATAAGHALA
HHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLKHLPVEGESFTDRGWKFEIVDMDGRKIDKLLVSDVRKPKGAEAE
HHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]