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The map label for this gene is ychE [C]

Identifier: 103488575

GI number: 103488575

Start: 3248095

End: 3248724

Strand: Direct

Name: ychE [C]

Synonym: Sala_3099

Alternate gene names: 103488575

Gene position: 3248095-3248724 (Clockwise)

Preceding gene: 103488574

Following gene: 103488578

Centisome position: 97.1

GC content: 64.76

Gene sequence:

>630_bases
ATGATCGACCTGTTCATCTCGGCCTTCGTCACGCTGTTCGTCGTCATCGACCCGCCGGGCTGCGCGCCGATCTATGCCAG
CCTGACCACCGGCGCGAGCGCGGCGCAGCGCCGGTCGATGGCGATCCGCGCCACCCTGATCGCGGGCGGCATCCTGATCT
TTTTCGCGATGTTCGGCGAAGCGCTGCTCGGCTTCCTGCACATCGACCTCGACAGTTTCCGTATTGCGGGCGGGATCATG
CTGTTCATCATCGCGATCGACATGGTGTTTGAAAAACGCACCGAACGCCGCGAACAGCGCGCCGAGAAGATCAAGGCGAC
GCCGGAGGTCGAGGATGTTTCGGTGTTTCCGATGGCGATGCCGATGCTCGCCGGGCCGGGGTCGATCGCTTCGGTGATGC
TGCTCGTGTCACAGAACAACGGGATCGAACGCGCCTTCGTGATCTTTGGCGCGCTGCTGCTTGTCCTCCTCCTGACGCTT
GCGGCCCTGCTCGCGGCGGGGCCGCTGATGCGGCTGATCGGCCACAAGGGCGAGGCGGTGATCACGCGGCTGCTCGGCGT
TCTGCTCGCCGCCCTTGCGGCGCAGTTCGTGATCGACGGGCTGAAGGCGAGTTTTCCGACGCTGACGTGA

Upstream 100 bases:

>100_bases
CCGTCCGCGCCGACAAGTCGCGTCGCGTGACGATCCGGCTGTGGGACGGCAAGGATATGGCGACCGTCATCGACGACCGG
GTCGCGGCGCCGAAGCAGCC

Downstream 100 bases:

>100_bases
GTGCGCTTTCCGCTGCGCGGAAAGCGGCGGCACCGGCCCGCTCCCCACCCGGCCTCCCATAGGCTACTATCGTCGGGGAG
GCCGGGTGGGGGAGCGGGCC

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIDLFISAFVTLFVVIDPPGCAPIYASLTTGASAAQRRSMAIRATLIAGGILIFFAMFGEALLGFLHIDLDSFRIAGGIM
LFIIAIDMVFEKRTERREQRAEKIKATPEVEDVSVFPMAMPMLAGPGSIASVMLLVSQNNGIERAFVIFGALLLVLLLTL
AALLAAGPLMRLIGHKGEAVITRLLGVLLAALAAQFVIDGLKASFPTLT

Sequences:

>Translated_209_residues
MIDLFISAFVTLFVVIDPPGCAPIYASLTTGASAAQRRSMAIRATLIAGGILIFFAMFGEALLGFLHIDLDSFRIAGGIM
LFIIAIDMVFEKRTERREQRAEKIKATPEVEDVSVFPMAMPMLAGPGSIASVMLLVSQNNGIERAFVIFGALLLVLLLTL
AALLAAGPLMRLIGHKGEAVITRLLGVLLAALAAQFVIDGLKASFPTLT
>Mature_209_residues
MIDLFISAFVTLFVVIDPPGCAPIYASLTTGASAAQRRSMAIRATLIAGGILIFFAMFGEALLGFLHIDLDSFRIAGGIM
LFIIAIDMVFEKRTERREQRAEKIKATPEVEDVSVFPMAMPMLAGPGSIASVMLLVSQNNGIERAFVIFGALLLVLLLTL
AALLAAGPLMRLIGHKGEAVITRLLGVLLAALAAQFVIDGLKASFPTLT

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=205, Percent_Identity=34.6341463414634, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=35.0253807106599, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=25.2525252525253, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22276; Mature: 22276

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLFISAFVTLFVVIDPPGCAPIYASLTTGASAAQRRSMAIRATLIAGGILIFFAMFGE
CHHHHHHHHHHHEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGFLHIDLDSFRIAGGIMLFIIAIDMVFEKRTERREQRAEKIKATPEVEDVSVFPMAM
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
PMLAGPGSIASVMLLVSQNNGIERAFVIFGALLLVLLLTLAALLAAGPLMRLIGHKGEAV
HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ITRLLGVLLAALAAQFVIDGLKASFPTLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDLFISAFVTLFVVIDPPGCAPIYASLTTGASAAQRRSMAIRATLIAGGILIFFAMFGE
CHHHHHHHHHHHEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGFLHIDLDSFRIAGGIMLFIIAIDMVFEKRTERREQRAEKIKATPEVEDVSVFPMAM
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
PMLAGPGSIASVMLLVSQNNGIERAFVIFGALLLVLLLTLAALLAAGPLMRLIGHKGEAV
HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ITRLLGVLLAALAAQFVIDGLKASFPTLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]