The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488574

Identifier: 103488574

GI number: 103488574

Start: 3247424

End: 3248098

Strand: Direct

Name: 103488574

Synonym: Sala_3098

Alternate gene names: NA

Gene position: 3247424-3248098 (Clockwise)

Preceding gene: 103488573

Following gene: 103488575

Centisome position: 97.08

GC content: 69.78

Gene sequence:

>675_bases
ATGCGCCGGTTGCTCCTTTCAACAATTGCCATTTCCTTGCTGGCGGGCTGCGCGGGGCCGCGAGACGAGTTTCGCAACCG
TCCGCTCGCCGCCAACCCCAGCGCCTTCGTCGCGGCTGAAATCGCCTTCGCGCGGCTGGCGCAGGAAAAGGGGCAGTGGA
CCGCGTTCCGCGAAACCGCGCATCCCGATGCCGCGATGTTCGTGCCCGAGCTGGTCAGGGCACGCGACTGGCTGAAGGCG
CAGGCCGACCCGGCGGAGGCGGTGAAATGGCAGCCGCACGCCGTCTATGTCAGCTGCGACGGCAATGCCGCCGCGACGAC
CGGCGCGTGGCAGAAGGGAGCGGCGCACGGCTATTTCACGACCGTCTGGCTGCGCGATCCGATGAAGGGCGACATGCGCT
GGGTGCTCGATCATGGCGATGCGCTGGCGACGCCGCGCCCGGCGCCCGATTTCATCGCGTCGAAGCAGGCGACGTGCGGG
TCGCGGCCCGCGGTGCCGATCGAGGCGGGCGCCGAGGGCGAGGATATGGCCGTCGGCCTGTCGCCCGACCAGACGCTGAG
CTGGACGTCGACCGTCCGCGCCGACAAGTCGCGTCGCGTGACGATCCGGCTGTGGGACGGCAAGGATATGGCGACCGTCA
TCGACGACCGGGTCGCGGCGCCGAAGCAGCCATGA

Upstream 100 bases:

>100_bases
TGCCGGGCGGGGTCGGGCCGATGACCATTGCCTGCCTGCTCCGCAACACGCTCGTCGCCGCGCACCGCCGGGCGGGGCTG
GCCGATCCGGAAGGGTTCTG

Downstream 100 bases:

>100_bases
TCGACCTGTTCATCTCGGCCTTCGTCACGCTGTTCGTCGTCATCGACCCGCCGGGCTGCGCGCCGATCTATGCCAGCCTG
ACCACCGGCGCGAGCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRRLLLSTIAISLLAGCAGPRDEFRNRPLAANPSAFVAAEIAFARLAQEKGQWTAFRETAHPDAAMFVPELVRARDWLKA
QADPAEAVKWQPHAVYVSCDGNAAATTGAWQKGAAHGYFTTVWLRDPMKGDMRWVLDHGDALATPRPAPDFIASKQATCG
SRPAVPIEAGAEGEDMAVGLSPDQTLSWTSTVRADKSRRVTIRLWDGKDMATVIDDRVAAPKQP

Sequences:

>Translated_224_residues
MRRLLLSTIAISLLAGCAGPRDEFRNRPLAANPSAFVAAEIAFARLAQEKGQWTAFRETAHPDAAMFVPELVRARDWLKA
QADPAEAVKWQPHAVYVSCDGNAAATTGAWQKGAAHGYFTTVWLRDPMKGDMRWVLDHGDALATPRPAPDFIASKQATCG
SRPAVPIEAGAEGEDMAVGLSPDQTLSWTSTVRADKSRRVTIRLWDGKDMATVIDDRVAAPKQP
>Mature_224_residues
MRRLLLSTIAISLLAGCAGPRDEFRNRPLAANPSAFVAAEIAFARLAQEKGQWTAFRETAHPDAAMFVPELVRARDWLKA
QADPAEAVKWQPHAVYVSCDGNAAATTGAWQKGAAHGYFTTVWLRDPMKGDMRWVLDHGDALATPRPAPDFIASKQATCG
SRPAVPIEAGAEGEDMAVGLSPDQTLSWTSTVRADKSRRVTIRLWDGKDMATVIDDRVAAPKQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24320; Mature: 24320

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLLSTIAISLLAGCAGPRDEFRNRPLAANPSAFVAAEIAFARLAQEKGQWTAFRETA
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHCC
HPDAAMFVPELVRARDWLKAQADPAEAVKWQPHAVYVSCDGNAAATTGAWQKGAAHGYFT
CCCHHHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE
TVWLRDPMKGDMRWVLDHGDALATPRPAPDFIASKQATCGSRPAVPIEAGAEGEDMAVGL
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEC
SPDQTLSWTSTVRADKSRRVTIRLWDGKDMATVIDDRVAAPKQP
CCCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRLLLSTIAISLLAGCAGPRDEFRNRPLAANPSAFVAAEIAFARLAQEKGQWTAFRETA
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHCC
HPDAAMFVPELVRARDWLKAQADPAEAVKWQPHAVYVSCDGNAAATTGAWQKGAAHGYFT
CCCHHHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE
TVWLRDPMKGDMRWVLDHGDALATPRPAPDFIASKQATCGSRPAVPIEAGAEGEDMAVGL
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEC
SPDQTLSWTSTVRADKSRRVTIRLWDGKDMATVIDDRVAAPKQP
CCCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA