Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488567

Identifier: 103488567

GI number: 103488567

Start: 3242158

End: 3242496

Strand: Reverse

Name: 103488567

Synonym: Sala_3091

Alternate gene names: NA

Gene position: 3242496-3242158 (Counterclockwise)

Preceding gene: 103488568

Following gene: 103488559

Centisome position: 96.93

GC content: 69.32

Gene sequence:

>339_bases
TTGAGGCGATCGCGCATGACGGGTTTCAAAATCCTCGCCGTCGGCGGAGCGGCGGCGCTGGCGCTGTCGGCCTGCGCCTC
GGTCGGCGGGCCGGGCGTCAGCACCTATTATGAATGCGACCGTGGCACGCGGCTGAAGGTCGACTTCGTCGGCGACCGCG
CGCTCGTCGCCGTCAACGGCGCCCGCGCCGTGCCGATGCGGCAGACTCCGGCGGCGAGCGGCGTCGTCTACGAAAACCGT
CAGGGATGGCGGCTGCATACCAAGGGCAATGAGGCGATGTGGAACACCGCCGCACGTTCGGCGCCCGAAAGCTGCCGCCA
GATTGCCGTTCCCCGCTAG

Upstream 100 bases:

>100_bases
GGTGCCGTTCGATCGGCTGGAATGGTTCGGCGCGCGAACATATGGAAACGGTCGGCGGCCGCATCTATCTCGCCGACGTA
CTGTGTGTCCGGTCGGGATA

Downstream 100 bases:

>100_bases
GGTCAGGGCCGGGCGGGCGCCTTGCAGCCGCGTTCCAGTCCGATGCCTTTCAGGAAACCGCGGCGCACCGTTCCCGCATA
AACCGCGAGCGCATAGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRRSRMTGFKILAVGGAAALALSACASVGGPGVSTYYECDRGTRLKVDFVGDRALVAVNGARAVPMRQTPAASGVVYENR
QGWRLHTKGNEAMWNTAARSAPESCRQIAVPR

Sequences:

>Translated_112_residues
MRRSRMTGFKILAVGGAAALALSACASVGGPGVSTYYECDRGTRLKVDFVGDRALVAVNGARAVPMRQTPAASGVVYENR
QGWRLHTKGNEAMWNTAARSAPESCRQIAVPR
>Mature_112_residues
MRRSRMTGFKILAVGGAAALALSACASVGGPGVSTYYECDRGTRLKVDFVGDRALVAVNGARAVPMRQTPAASGVVYENR
QGWRLHTKGNEAMWNTAARSAPESCRQIAVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11925; Mature: 11925

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSRMTGFKILAVGGAAALALSACASVGGPGVSTYYECDRGTRLKVDFVGDRALVAVNG
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCEEEEEECC
ARAVPMRQTPAASGVVYENRQGWRLHTKGNEAMWNTAARSAPESCRQIAVPR
CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MRRSRMTGFKILAVGGAAALALSACASVGGPGVSTYYECDRGTRLKVDFVGDRALVAVNG
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCEEEEEECC
ARAVPMRQTPAASGVVYENRQGWRLHTKGNEAMWNTAARSAPESCRQIAVPR
CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA