Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488568

Identifier: 103488568

GI number: 103488568

Start: 3242493

End: 3243104

Strand: Reverse

Name: 103488568

Synonym: Sala_3092

Alternate gene names: NA

Gene position: 3243104-3242493 (Counterclockwise)

Preceding gene: 103488569

Following gene: 103488567

Centisome position: 96.95

GC content: 65.85

Gene sequence:

>612_bases
ATGAAATCCGCATGTCGTTTGTCGATGCTCGCCGCGGTTGCGGTGTCGGTGGGAGCGGGTTCACTCGCCTCCTTGAACGC
CCAGCCCCCCGCAGACAAGATGTACCGGCCGCCCGAGGCGACGATCTACCGCGACGCCGGATATCGCGGCCCCGCCGTCT
TCATCGGCGAGGCCAAGCCGAACCTCGGCCTTGCCTGGCCGGTCAATTCGGTTCGCGTCGCAAGCGGGCGGTGGGAGCTT
TGCGAGCGCACGCGCTATCGCGGCAATTGCCGGACCATCGACCGCGACACGCCGATGCTCAACAATATCCTGCGCGGGCT
GACGATCCAGTCGATCCGTCCGGTTGGCGATGACGGCGGCTGGAACCCGCATCCGCCCGCCAACGACCAGAGTGTGCGCG
GCAATTTTGCCGAGTTCCATACCCAGCCATCGGCCGGGAACAGCCGTGTTCCCGCCTGCACCAGCGGTTCGGCGACCGCC
AACTGCGCGGCGCGGAGCGCCGATACATGGTGCCGTTCGATCGGCTGGAATGGTTCGGCGCGCGAACATATGGAAACGGT
CGGCGGCCGCATCTATCTCGCCGACGTACTGTGTGTCCGGTCGGGATATTGA

Upstream 100 bases:

>100_bases
CGGCCAGAATCAGGCGTGACGATTGCAAGCGACAGACAAATAACGTAACCGTTCCGCTGAAAAAGTGTCCCGGGTCGTAA
TCGTCAACAGGGAGGCTGCC

Downstream 100 bases:

>100_bases
GGCGATCGCGCATGACGGGTTTCAAAATCCTCGCCGTCGGCGGAGCGGCGGCGCTGGCGCTGTCGGCCTGCGCCTCGGTC
GGCGGGCCGGGCGTCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKSACRLSMLAAVAVSVGAGSLASLNAQPPADKMYRPPEATIYRDAGYRGPAVFIGEAKPNLGLAWPVNSVRVASGRWEL
CERTRYRGNCRTIDRDTPMLNNILRGLTIQSIRPVGDDGGWNPHPPANDQSVRGNFAEFHTQPSAGNSRVPACTSGSATA
NCAARSADTWCRSIGWNGSAREHMETVGGRIYLADVLCVRSGY

Sequences:

>Translated_203_residues
MKSACRLSMLAAVAVSVGAGSLASLNAQPPADKMYRPPEATIYRDAGYRGPAVFIGEAKPNLGLAWPVNSVRVASGRWEL
CERTRYRGNCRTIDRDTPMLNNILRGLTIQSIRPVGDDGGWNPHPPANDQSVRGNFAEFHTQPSAGNSRVPACTSGSATA
NCAARSADTWCRSIGWNGSAREHMETVGGRIYLADVLCVRSGY
>Mature_203_residues
MKSACRLSMLAAVAVSVGAGSLASLNAQPPADKMYRPPEATIYRDAGYRGPAVFIGEAKPNLGLAWPVNSVRVASGRWEL
CERTRYRGNCRTIDRDTPMLNNILRGLTIQSIRPVGDDGGWNPHPPANDQSVRGNFAEFHTQPSAGNSRVPACTSGSATA
NCAARSADTWCRSIGWNGSAREHMETVGGRIYLADVLCVRSGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21810; Mature: 21810

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSACRLSMLAAVAVSVGAGSLASLNAQPPADKMYRPPEATIYRDAGYRGPAVFIGEAKP
CCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCCEEEECCCCCCCEEEEECCCC
NLGLAWPVNSVRVASGRWELCERTRYRGNCRTIDRDTPMLNNILRGLTIQSIRPVGDDGG
CCEEECCCCCEEECCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHCCCCCCCCC
WNPHPPANDQSVRGNFAEFHTQPSAGNSRVPACTSGSATANCAARSADTWCRSIGWNGSA
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCHHHHCCHHHHHHHCCCCCCH
REHMETVGGRIYLADVLCVRSGY
HHHHHHHCCEEEEEEHHHHHCCC
>Mature Secondary Structure
MKSACRLSMLAAVAVSVGAGSLASLNAQPPADKMYRPPEATIYRDAGYRGPAVFIGEAKP
CCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCCEEEECCCCCCCEEEEECCCC
NLGLAWPVNSVRVASGRWELCERTRYRGNCRTIDRDTPMLNNILRGLTIQSIRPVGDDGG
CCEEECCCCCEEECCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHCCCCCCCCC
WNPHPPANDQSVRGNFAEFHTQPSAGNSRVPACTSGSATANCAARSADTWCRSIGWNGSA
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCHHHHCCHHHHHHHCCCCCCH
REHMETVGGRIYLADVLCVRSGY
HHHHHHHCCEEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA