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The map label for this gene is ybaY [H]

Identifier: 103488558

GI number: 103488558

Start: 3235044

End: 3235469

Strand: Reverse

Name: ybaY [H]

Synonym: Sala_3082

Alternate gene names: 103488558

Gene position: 3235469-3235044 (Counterclockwise)

Preceding gene: 103488559

Following gene: 103488557

Centisome position: 96.72

GC content: 66.9

Gene sequence:

>426_bases
ATGGTTCGCGTCACCCGAATGCTCGCCGTCGGCATGGTCGCCGCCCCGCTGCTCGCCGCCTGCGCGACAATCCCGCCCGC
CGAGCAGCCCGTGACCGTCACCGGGAGCATCACCTATCGCGAGCGCATCGCGTTGCCGCCGACGGCGCGGGTCGAAATCG
CCCTTGCCGACGTCAGCCTGGCCGATGCGCCATCGACGACGGTCGCTCGGCAATCCTTCACCGCCGACGGCCGGCAGGTG
CCCTTTGCCTTTTCGCTGACGGTCGATCAGCGCCAGCTCGACCCGCGCCACAGTTACGCCGTGTCGGCGCGCATCAGCGA
CGCGTCGGGGCGACTGATGTTCATCACCGACACGCGCAACAATGTTCCGTTCGATGGCCGCCGCGTGATCGATATGGGCA
TGTTGATGCTGGTCAAAACGCATTGA

Upstream 100 bases:

>100_bases
TGTTGAACTCGAAGGCTGACAGCGGCACGACGGGCGCGACAGCATGGGTTCACCTCGATGGCATTAGGCGCGCGCCAACC
ATCGGAAAAGGAGACACATC

Downstream 100 bases:

>100_bases
ACTAACCCAAGCATAGCTATGCGCGGCTTGACCCTCGGCCTTCGCAGGTGCAGCAAGCTGGGCGCATGGGCCCACCGATC
CAGATCTCGCAGAATCCCGA

Product: lipoprotein-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MVRVTRMLAVGMVAAPLLAACATIPPAEQPVTVTGSITYRERIALPPTARVEIALADVSLADAPSTTVARQSFTADGRQV
PFAFSLTVDQRQLDPRHSYAVSARISDASGRLMFITDTRNNVPFDGRRVIDMGMLMLVKTH

Sequences:

>Translated_141_residues
MVRVTRMLAVGMVAAPLLAACATIPPAEQPVTVTGSITYRERIALPPTARVEIALADVSLADAPSTTVARQSFTADGRQV
PFAFSLTVDQRQLDPRHSYAVSARISDASGRLMFITDTRNNVPFDGRRVIDMGMLMLVKTH
>Mature_141_residues
MVRVTRMLAVGMVAAPLLAACATIPPAEQPVTVTGSITYRERIALPPTARVEIALADVSLADAPSTTVARQSFTADGRQV
PFAFSLTVDQRQLDPRHSYAVSARISDASGRLMFITDTRNNVPFDGRRVIDMGMLMLVKTH

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=120, Percent_Identity=35.8333333333333, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15269; Mature: 15269

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVTRMLAVGMVAAPLLAACATIPPAEQPVTVTGSITYRERIALPPTARVEIALADVSL
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEE
ADAPSTTVARQSFTADGRQVPFAFSLTVDQRQLDPRHSYAVSARISDASGRLMFITDTRN
CCCCCCCEECCCCCCCCCCCCEEEEEEECHHHCCCCCCEEEEEEEECCCCCEEEEEECCC
NVPFDGRRVIDMGMLMLVKTH
CCCCCCEEEEECCEEEEEECC
>Mature Secondary Structure
MVRVTRMLAVGMVAAPLLAACATIPPAEQPVTVTGSITYRERIALPPTARVEIALADVSL
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEE
ADAPSTTVARQSFTADGRQVPFAFSLTVDQRQLDPRHSYAVSARISDASGRLMFITDTRN
CCCCCCCEECCCCCCCCCCCCEEEEEEECHHHCCCCCCEEEEEEEECCCCCEEEEEECCC
NVPFDGRRVIDMGMLMLVKTH
CCCCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]