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The map label for this gene is xynB [H]

Identifier: 103488514

GI number: 103488514

Start: 3185434

End: 3186405

Strand: Reverse

Name: xynB [H]

Synonym: Sala_3038

Alternate gene names: 103488514

Gene position: 3186405-3185434 (Counterclockwise)

Preceding gene: 103488515

Following gene: 103488509

Centisome position: 95.25

GC content: 70.47

Gene sequence:

>972_bases
ATGACGGTCGGTCGCCGCGCGCTGCTGGCCGCCAGCCTCGCGCTGCCCTTCGCGAGCGTCGCCGCGCACACGTCGTGGAC
GCGGCCGACGGGTGTCGTTCCCGACGCGAGCCTGCCGCTGTGGCCCGGTGGCCATGTCGTCCCGCCGCGCGGCCTTGCCG
AACGGGTGATCCAGCGCAGCGACGAGGCGGATGCCAGCGACCGGATGCTCGAAGGAATCACGCGCCCGCGGCTCGACATC
TTCCGCCCCGCAAGGCCCAATGGCGCGGCGGTGATTCTCGCCCCCGGCGGCGGCTATCGCTATGTCGTGATCGACAAGGA
AGGCTATGAGCTGGCGCGCTGGCTGAGCGAACGCGGCGTCACCGTTTACGTCCTCTTTTATCGCCTGCCGGGCGACGGCT
GGGCGAACGGGGCCGACGTGCCGCTCGCCGATGCTCAGCGCGCGATGCGGCTGGTGCGCAGCCGCGCGGGTGCCGACGGC
ATCGACCCGGCGCGCGTCGTCTTTGGCGGTTTTTCGGCGGGCGGACAGGTGGCGACGAGCCTGCTCACGCGCTTCGACGC
GACGGTCTACGCGCCCGTCGATGCCGCCGACGCGCTGCCCGCGCGACCCGATGCGCTCGCCGCCATCTATCCGGTCGTGT
CGATGGACCCCGCGATCGCCCATGCGGTGAGCCGCGAGAAGCTGATCGGCGCGAACCCCGATGCGGCGCGCGAGGCGCTC
CATTCGCCCGAACGCAATGTCCGCGCCGACCAGCCACCGCTCTGGCTGCTCCACGCCGAGGACGATGATGTCGTCAGGAT
CGATAACAGCGTGCGCCTGCGCGATGCGGCGCGGCGTATCGGCGCGCCGTGCGAAGCACATTTCTTCGAGCGCGGCGGCC
ATGGTTTCGGGCTGATGAAAACCGCGGGGCTGCCCATTGCGATCTGGCCCGAACTGCTTTGGAACTGGCTGGGGTCGCAC
GGGATCGTTTAA

Upstream 100 bases:

>100_bases
TGGCCGCGTGGCTCTACAAGGGCGCGAGGGTCGGCATCCGCCAGACAGGAAGCGAACCGCTGGTCCTCATCATCGCCTAT
CCCAACCAAAGGGTCGGACA

Downstream 100 bases:

>100_bases
CCAACCGTCATCCCGGCGAAGGCCGGGATCTCACCCTCGCCCCCTCACGCACCGGCGAGATCCCGGCCTTCGCCGGGATG
ACGAACAAGGGCATTGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTVGRRALLAASLALPFASVAAHTSWTRPTGVVPDASLPLWPGGHVVPPRGLAERVIQRSDEADASDRMLEGITRPRLDI
FRPARPNGAAVILAPGGGYRYVVIDKEGYELARWLSERGVTVYVLFYRLPGDGWANGADVPLADAQRAMRLVRSRAGADG
IDPARVVFGGFSAGGQVATSLLTRFDATVYAPVDAADALPARPDALAAIYPVVSMDPAIAHAVSREKLIGANPDAAREAL
HSPERNVRADQPPLWLLHAEDDDVVRIDNSVRLRDAARRIGAPCEAHFFERGGHGFGLMKTAGLPIAIWPELLWNWLGSH
GIV

Sequences:

>Translated_323_residues
MTVGRRALLAASLALPFASVAAHTSWTRPTGVVPDASLPLWPGGHVVPPRGLAERVIQRSDEADASDRMLEGITRPRLDI
FRPARPNGAAVILAPGGGYRYVVIDKEGYELARWLSERGVTVYVLFYRLPGDGWANGADVPLADAQRAMRLVRSRAGADG
IDPARVVFGGFSAGGQVATSLLTRFDATVYAPVDAADALPARPDALAAIYPVVSMDPAIAHAVSREKLIGANPDAAREAL
HSPERNVRADQPPLWLLHAEDDDVVRIDNSVRLRDAARRIGAPCEAHFFERGGHGFGLMKTAGLPIAIWPELLWNWLGSH
GIV
>Mature_322_residues
TVGRRALLAASLALPFASVAAHTSWTRPTGVVPDASLPLWPGGHVVPPRGLAERVIQRSDEADASDRMLEGITRPRLDIF
RPARPNGAAVILAPGGGYRYVVIDKEGYELARWLSERGVTVYVLFYRLPGDGWANGADVPLADAQRAMRLVRSRAGADGI
DPARVVFGGFSAGGQVATSLLTRFDATVYAPVDAADALPARPDALAAIYPVVSMDPAIAHAVSREKLIGANPDAAREALH
SPERNVRADQPPLWLLHAEDDDVVRIDNSVRLRDAARRIGAPCEAHFFERGGHGFGLMKTAGLPIAIWPELLWNWLGSHG
IV

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 34712; Mature: 34581

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGRRALLAASLALPFASVAAHTSWTRPTGVVPDASLPLWPGGHVVPPRGLAERVIQRS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
DEADASDRMLEGITRPRLDIFRPARPNGAAVILAPGGGYRYVVIDKEGYELARWLSERGV
CCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCC
TVYVLFYRLPGDGWANGADVPLADAQRAMRLVRSRAGADGIDPARVVFGGFSAGGQVATS
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCHHHHHH
LLTRFDATVYAPVDAADALPARPDALAAIYPVVSMDPAIAHAVSREKLIGANPDAAREAL
HHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
HSPERNVRADQPPLWLLHAEDDDVVRIDNSVRLRDAARRIGAPCEAHFFERGGHGFGLMK
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCCCEEHH
TAGLPIAIWPELLWNWLGSHGIV
HCCCCEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVGRRALLAASLALPFASVAAHTSWTRPTGVVPDASLPLWPGGHVVPPRGLAERVIQRS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
DEADASDRMLEGITRPRLDIFRPARPNGAAVILAPGGGYRYVVIDKEGYELARWLSERGV
CCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCC
TVYVLFYRLPGDGWANGADVPLADAQRAMRLVRSRAGADGIDPARVVFGGFSAGGQVATS
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCHHHHHH
LLTRFDATVYAPVDAADALPARPDALAAIYPVVSMDPAIAHAVSREKLIGANPDAAREAL
HHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
HSPERNVRADQPPLWLLHAEDDDVVRIDNSVRLRDAARRIGAPCEAHFFERGGHGFGLMK
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCCCEEHH
TAGLPIAIWPELLWNWLGSHGIV
HCCCCEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]