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The map label for this gene is sdhC [H]

Identifier: 103488506

GI number: 103488506

Start: 3177200

End: 3177643

Strand: Direct

Name: sdhC [H]

Synonym: Sala_3030

Alternate gene names: 103488506

Gene position: 3177200-3177643 (Clockwise)

Preceding gene: 103488505

Following gene: 103488507

Centisome position: 94.98

GC content: 65.09

Gene sequence:

>444_bases
ATGGCTGGCAACGAACCGGGCGCGCGGCCGCGCTCGCCTCACCTGCAAGTGTATAAATGGACGCCCGCGATGGCGGTCTC
CATCTTTCACCGCGTCAGCGGCGACGGGCTGGCGATCGTCGGCGCGGGCATGTTCCTCTGGTGGCTCGGCGCGCTCGCCG
CGGGCCCCGACGCCTATGCCGCCTTTGTCGCCTGCGTCTGGCACGATCCCGATGCGGGGACATTCCATCAGGTGACCAAT
ATCCTCGGCAAGATCGTGTTGATCGGCCTCACCTGGGCCTTTTTCCAGCATCTCTTTTCGGGGCTGCGCCATTTCGTGCT
CGACGCGGGCGCGGGGTATGAACTCAGGACGAACAGGCTCTGGTCGACGCTCGTTTTCGTCGGTGCGCTGGCCGCGACCG
CCGCGACCTGGCTCTACATACTGCAGGGGACGTTCAATGGGTAA

Upstream 100 bases:

>100_bases
CGCAAAATCTTGCGTCCATCGCCCGCTAAGCAATTGCATATCGCGGCGGGAAGGCTTAACCGGCGGCGCATCGACCGTTT
AGAGTCAGGACAGGGCTGAT

Downstream 100 bases:

>100_bases
TGGAACGCGCCTCGGTCGCGTGCGCGGGCTCGGCTCGTCGCATCACGGATCGCATCACTGGCTGCAACAGCGGCTGACCG
CGCTCGGCAACATCCTGCTC

Product: succinate dehydrogenase, cytochrome b subunit

Products: fumarate; reduced acceptor

Alternate protein names: Cytochrome b-556 [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAGNEPGARPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYAAFVACVWHDPDAGTFHQVTN
ILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRLWSTLVFVGALAATAATWLYILQGTFNG

Sequences:

>Translated_147_residues
MAGNEPGARPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYAAFVACVWHDPDAGTFHQVTN
ILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRLWSTLVFVGALAATAATWLYILQGTFNG
>Mature_146_residues
AGNEPGARPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYAAFVACVWHDPDAGTFHQVTNI
LGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRLWSTLVFVGALAATAATWLYILQGTFNG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b560 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018495
- InterPro:   IPR014314
- InterPro:   IPR014361
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 15917; Mature: 15785

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNEPGARPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYA
CCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHH
AFVACVWHDPDAGTFHQVTNILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRL
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH
WSTLVFVGALAATAATWLYILQGTFNG
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGNEPGARPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYA
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHH
AFVACVWHDPDAGTFHQVTNILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRL
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH
WSTLVFVGALAATAATWLYILQGTFNG
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA