Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488460

Identifier: 103488460

GI number: 103488460

Start: 3125893

End: 3126303

Strand: Reverse

Name: 103488460

Synonym: Sala_2983

Alternate gene names: NA

Gene position: 3126303-3125893 (Counterclockwise)

Preceding gene: 103488461

Following gene: 103488456

Centisome position: 93.46

GC content: 73.48

Gene sequence:

>411_bases
ATGCGGCGCGGGCCGGCCCGCGATCCGCGCGGGCGCGGATTGTGGCGCGGGGCGGTCATCGGGCGCCGGATTATTCCACG
GCCGCCTGTCGCGCTCGGCGATCGCAGCGGCCAGACGGTCTCTGCCGTCGTTCGCCTTGGCGGGCCGCGCCGCCGGTTTC
GGCATCGGGGCGGGCCGCGCGCTGAGGCCCGATTCGGCGCGCGCGGCGGCCGACATGTCGGGAGCGACGCTCGCCTTCGC
GGGGCGGATCGGCTCGACGCCGAGCTTGCGGTCGTGCTCGGCCATACGTTCGGCCGCCGTCGGCGGGGTCTGCCCGGTTT
CGCGGTCGATCACCACCAGCCGCCCGCTGCGCTCGACGACGGAAAAACGGCTGGGAGGCGGACGATCAACCAATACCGAA
TTGTTCCTTGA

Upstream 100 bases:

>100_bases
CGGTGAGCTCGGCCTGACCCTTGGGGCCCAGTTCGACGGTGCGCGGCCCTTTTGCATCCCACCATTTGCCGGTGACGATC
GTCTTGCGCGCGCCGCCCAC

Downstream 100 bases:

>100_bases
GCGCGAGCATCGCGAGCGCGGCCTTCGCCGCCTCGCCGCCCTTATCCTTGCGCGTCTTGTCGGCGCGCGCAAGCGCCTGT
TCTTCATTCTCGACAGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRRGPARDPRGRGLWRGAVIGRRIIPRPPVALGDRSGQTVSAVVRLGGPRRRFRHRGGPRAEARFGARGGRHVGSDARLR
GADRLDAELAVVLGHTFGRRRRGLPGFAVDHHQPPAALDDGKTAGRRTINQYRIVP

Sequences:

>Translated_136_residues
MRRGPARDPRGRGLWRGAVIGRRIIPRPPVALGDRSGQTVSAVVRLGGPRRRFRHRGGPRAEARFGARGGRHVGSDARLR
GADRLDAELAVVLGHTFGRRRRGLPGFAVDHHQPPAALDDGKTAGRRTINQYRIVP
>Mature_136_residues
MRRGPARDPRGRGLWRGAVIGRRIIPRPPVALGDRSGQTVSAVVRLGGPRRRFRHRGGPRAEARFGARGGRHVGSDARLR
GADRLDAELAVVLGHTFGRRRRGLPGFAVDHHQPPAALDDGKTAGRRTINQYRIVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14895; Mature: 14895

Theoretical pI: Translated: 12.68; Mature: 12.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGPARDPRGRGLWRGAVIGRRIIPRPPVALGDRSGQTVSAVVRLGGPRRRFRHRGGPR
CCCCCCCCCCCCCEEHHHHHCCCCCCCCCCEECCCCCCCEEHHHHCCCHHHHHHHCCCCC
AEARFGARGGRHVGSDARLRGADRLDAELAVVLGHTFGRRRRGLPGFAVDHHQPPAALDD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GKTAGRRTINQYRIVP
CCCCHHHHHCCCCCCC
>Mature Secondary Structure
MRRGPARDPRGRGLWRGAVIGRRIIPRPPVALGDRSGQTVSAVVRLGGPRRRFRHRGGPR
CCCCCCCCCCCCCEEHHHHHCCCCCCCCCCEECCCCCCCEEHHHHCCCHHHHHHHCCCCC
AEARFGARGGRHVGSDARLRGADRLDAELAVVLGHTFGRRRRGLPGFAVDHHQPPAALDD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GKTAGRRTINQYRIVP
CCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA