The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488443

Identifier: 103488443

GI number: 103488443

Start: 3110038

End: 3111348

Strand: Direct

Name: 103488443

Synonym: Sala_2966

Alternate gene names: NA

Gene position: 3110038-3111348 (Clockwise)

Preceding gene: 103488442

Following gene: 103488444

Centisome position: 92.97

GC content: 71.17

Gene sequence:

>1311_bases
GTGATCTACCCCACCCGCCGCGCCATCTATCTGCTGCTCGCGGGTGCGCCGCTGGCGCTGGTGCTCGGACTGGTCCGGCC
CGAGCTGTGGCTGGTCGCGCCCGGCTGGATCGGGGCGATCCTCGCCTGCCTGATCCTCGACACGCTGTCGGGGGCCAATC
CGCGCCACCTGACGCTCGACGCGCGCTATCCGGCGCAGGTCGGCGTCGGCGACCCCTTCGACCTGTCGCTCGCCGCGCGT
GGCCGCACCCTGCCGCCGCGCGCCGGGATCGCGCTGTCGCTCGACGAGCGGCTGGCCGTGGGCGGACGGCTGGCGGGTGA
GATGCGCCGCACCGAGGGCGCGCTCGTCGGCACGCTGTCGCTCGCCGCGACGCGGCGCGGGCAGGCGGAGGTCACGGCGC
TGTGGGTGCGCTGGGCGGGGCCGCTCGGGCTGGTGTGGAAACAGCGCCGGTTCACGATGGGCGGCGCGATCACCGTCGTG
CCCAGCCTGCGCGCGGTGACCGACGCGGGGCGCCGTCTCTTCCAGCGGAACAACTGGTTCGGGCTCCGCCAGCAGCGCTT
CCGCGGTGAAGGCAGCGAGTTCGAGGCGCTCGCCGAATATCAGCCGGGGATGGATCGCCGCGCGATCGACTGGAACGCCT
CGGCGCGCCACGTCAAGCTGCTCGCCAAGGAATATCGTGTCGAGCGCGACAATCGCGTCATACTCGCGATCGATGCGGGG
CGCACGATGGCCGAACCCGTCGGCGGGATGCCGCGCGTCGACCGGGCCGTGTCGGCGGCGCTGCTCCTCGCCTATGTCGG
CCTGAAACTCAATGACCGGATCAGCCTCTTTTCCTTCGCCGCCAGACCGCAGGCGCTGACCCCCGCCTATCTGCACGTGC
AGGATTTCCCGGCGTTGCAGCGCGCGGCGAGCCGCGTCGACTATGCGCCGGTCGAAAGCAATTTCACGCTCGCGCTCACC
ACCTTGAGCGCGCAGCTCAACCGCCGCTCGCTGATTATCCTCTTCACCGAATTTGCCGACGCGACGAGCGCCGACCTGAT
GATTCGTGCGGCGGGGCGGCTGGCGAAAAAGCACCGGCTGCTCTTCGTCGTCATGCGCGACGAAGAGGTCGAGGCGGAGG
AGCGGCGCCATCCCGAAAGCGCCGCCGACGTCACGCGCGCAAACGTCGCGGCGGCGATGCTCGCCGATCGCCAGCTGGTG
ATTGCGCGGCTCCGGCGGCTCGGCGCCGACGTGATCGAGGTGCCCGCCGATGACATGGCGGCGCGCGCGGTCGAGGCCTA
TCTGGGCATCAAGCGGCAGGGCAGCCTGTGA

Upstream 100 bases:

>100_bases
TGCTGCGCCACCGCGTCATCCTGTCGGCGGCCGCCGAGATCGAGGGGCGCAGCGTCGAACAGGTCGTCGCCGCGCTGCTC
GAACGCGAGGCTGTGCCACG

Downstream 100 bases:

>100_bases
TCCCGCCGCCGCCCGCCATGCCGCGCGCGCTTGATGCGCCGAGTTTTTCGACGAGCCGCTTTCGCGCCGAGCGCGAGGGT
GACTGGATCGCCTTCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Von Willebrand Factor Type A; Secreted Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MIYPTRRAIYLLLAGAPLALVLGLVRPELWLVAPGWIGAILACLILDTLSGANPRHLTLDARYPAQVGVGDPFDLSLAAR
GRTLPPRAGIALSLDERLAVGGRLAGEMRRTEGALVGTLSLAATRRGQAEVTALWVRWAGPLGLVWKQRRFTMGGAITVV
PSLRAVTDAGRRLFQRNNWFGLRQQRFRGEGSEFEALAEYQPGMDRRAIDWNASARHVKLLAKEYRVERDNRVILAIDAG
RTMAEPVGGMPRVDRAVSAALLLAYVGLKLNDRISLFSFAARPQALTPAYLHVQDFPALQRAASRVDYAPVESNFTLALT
TLSAQLNRRSLIILFTEFADATSADLMIRAAGRLAKKHRLLFVVMRDEEVEAEERRHPESAADVTRANVAAAMLADRQLV
IARLRRLGADVIEVPADDMAARAVEAYLGIKRQGSL

Sequences:

>Translated_436_residues
MIYPTRRAIYLLLAGAPLALVLGLVRPELWLVAPGWIGAILACLILDTLSGANPRHLTLDARYPAQVGVGDPFDLSLAAR
GRTLPPRAGIALSLDERLAVGGRLAGEMRRTEGALVGTLSLAATRRGQAEVTALWVRWAGPLGLVWKQRRFTMGGAITVV
PSLRAVTDAGRRLFQRNNWFGLRQQRFRGEGSEFEALAEYQPGMDRRAIDWNASARHVKLLAKEYRVERDNRVILAIDAG
RTMAEPVGGMPRVDRAVSAALLLAYVGLKLNDRISLFSFAARPQALTPAYLHVQDFPALQRAASRVDYAPVESNFTLALT
TLSAQLNRRSLIILFTEFADATSADLMIRAAGRLAKKHRLLFVVMRDEEVEAEERRHPESAADVTRANVAAAMLADRQLV
IARLRRLGADVIEVPADDMAARAVEAYLGIKRQGSL
>Mature_436_residues
MIYPTRRAIYLLLAGAPLALVLGLVRPELWLVAPGWIGAILACLILDTLSGANPRHLTLDARYPAQVGVGDPFDLSLAAR
GRTLPPRAGIALSLDERLAVGGRLAGEMRRTEGALVGTLSLAATRRGQAEVTALWVRWAGPLGLVWKQRRFTMGGAITVV
PSLRAVTDAGRRLFQRNNWFGLRQQRFRGEGSEFEALAEYQPGMDRRAIDWNASARHVKLLAKEYRVERDNRVILAIDAG
RTMAEPVGGMPRVDRAVSAALLLAYVGLKLNDRISLFSFAARPQALTPAYLHVQDFPALQRAASRVDYAPVESNFTLALT
TLSAQLNRRSLIILFTEFADATSADLMIRAAGRLAKKHRLLFVVMRDEEVEAEERRHPESAADVTRANVAAAMLADRQLV
IARLRRLGADVIEVPADDMAARAVEAYLGIKRQGSL

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47848; Mature: 47848

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPTRRAIYLLLAGAPLALVLGLVRPELWLVAPGWIGAILACLILDTLSGANPRHLTLD
CCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE
ARYPAQVGVGDPFDLSLAARGRTLPPRAGIALSLDERLAVGGRLAGEMRRTEGALVGTLS
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHCCCCEEEEEE
LAATRRGQAEVTALWVRWAGPLGLVWKQRRFTMGGAITVVPSLRAVTDAGRRLFQRNNWF
HHHCCCCCCEEEEEEEEECCCCCHHHHHCEEECCCEEEECCCHHHHHHHHHHHHHCCCCC
GLRQQRFRGEGSEFEALAEYQPGMDRRAIDWNASARHVKLLAKEYRVERDNRVILAIDAG
CCHHHHHCCCCCHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECC
RTMAEPVGGMPRVDRAVSAALLLAYVGLKLNDRISLFSFAARPQALTPAYLHVQDFPALQ
CCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHH
RAASRVDYAPVESNFTLALTTLSAQLNRRSLIILFTEFADATSADLMIRAAGRLAKKHRL
HHHHCCCCCCCCCCCEEEEEEEEHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
LFVVMRDEEVEAEERRHPESAADVTRANVAAAMLADRQLVIARLRRLGADVIEVPADDMA
EEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
ARAVEAYLGIKRQGSL
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIYPTRRAIYLLLAGAPLALVLGLVRPELWLVAPGWIGAILACLILDTLSGANPRHLTLD
CCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE
ARYPAQVGVGDPFDLSLAARGRTLPPRAGIALSLDERLAVGGRLAGEMRRTEGALVGTLS
CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHCCCCEEEEEE
LAATRRGQAEVTALWVRWAGPLGLVWKQRRFTMGGAITVVPSLRAVTDAGRRLFQRNNWF
HHHCCCCCCEEEEEEEEECCCCCHHHHHCEEECCCEEEECCCHHHHHHHHHHHHHCCCCC
GLRQQRFRGEGSEFEALAEYQPGMDRRAIDWNASARHVKLLAKEYRVERDNRVILAIDAG
CCHHHHHCCCCCHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECC
RTMAEPVGGMPRVDRAVSAALLLAYVGLKLNDRISLFSFAARPQALTPAYLHVQDFPALQ
CCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHH
RAASRVDYAPVESNFTLALTTLSAQLNRRSLIILFTEFADATSADLMIRAAGRLAKKHRL
HHHHCCCCCCCCCCCEEEEEEEEHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEE
LFVVMRDEEVEAEERRHPESAADVTRANVAAAMLADRQLVIARLRRLGADVIEVPADDMA
EEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
ARAVEAYLGIKRQGSL
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA