Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488444

Identifier: 103488444

GI number: 103488444

Start: 3111345

End: 3112388

Strand: Direct

Name: 103488444

Synonym: Sala_2967

Alternate gene names: NA

Gene position: 3111345-3112388 (Clockwise)

Preceding gene: 103488443

Following gene: 103488445

Centisome position: 93.01

GC content: 66.28

Gene sequence:

>1044_bases
GTGATCCCGCCGCCGCCCGCCATGCCGCGCGCGCTTGATGCGCCGAGTTTTTCGACGAGCCGCTTTCGCGCCGAGCGCGA
GGGTGACTGGATCGCCTTCGACCGGCTGCTGACCCGATTGGAAAAAAAGGGTGCGAAAGGGCTGTCGAGCGAGGAACTGC
TGCAACTGCCGGTCCTCTATCGCGCGACCCTGTCGTCGCTGTCGATCGCGCGCGCGACCAGCCTCGACAAGGCGCTGCTC
GATCATCTCGAGGCGCTGTCGATCCGCGGCTATTTCCTCGTCTATGGCGTGCGCGAGAGCCGCTGGAGCCGCTTGCGCCG
CTTCTTCCTCTACGACTGGCCGGCGGCGGTGCGGGCGGTGTGGAAGGAAACGGTGGTCATCGCGCTGATCATCCTGCTCG
GCGCCCTGACCAGCTATTCGCTCGTGTCGAGCAACCCCGAATGGTACTATAATTTCGTCGACGAAGGCATGGCATCGGGG
CGCGACCCGCGCGCCAGCGCCGAATATCTGCAATCGACGCTCGGCCAAGGCGAGGCGGCGGCGGGCAAGGGCGAAAGCGG
CCTTCATATCTTCGCGACCTATTTGTTCACCCACAACAGCCGTGTGTCGATCCTCTCCTTCGCGCTCGGCTTCGCCTTTG
GCGTGCCGACGATGATGCTGGAGTTCTACCAGGGCATCGGGCTCGGCGCGATGATGGCGGTCTTTTCGGCCAAGGGGCTG
GGGGTTGATTTCGGCGGCTGGCTGTTCATCCATGGCACGACCGAATTATTCGCGGCGGCGCTGGCGGGCGCGGCGGGACT
GCGCATCGGTGCCGCGGTCGTCTTTCCCGGCGCGCGCGGGCGGCTGGAGGCGGCGGCCGCGGCGGGGCGCACCGCGGGCA
AGGTGATGATCGGCGTCATTCTGATGCTGCTCGCCGCGGGCCTGCTCGAAGGCTTTGGGCGCCAGCTCATCACCGACACG
ATGCTGCGCTATGCGATCGGAACGCTGATGCTGCTGCTCTGGCTGGCCTATTATTATATCCCGCGGCGCGGGGACGCGGC
GTGA

Upstream 100 bases:

>100_bases
GGCTCCGGCGGCTCGGCGCCGACGTGATCGAGGTGCCCGCCGATGACATGGCGGCGCGCGCGGTCGAGGCCTATCTGGGC
ATCAAGCGGCAGGGCAGCCT

Downstream 100 bases:

>100_bases
CCGCGGCTGCCAACGCCAAGGCACGCGCCGCGAGGGCCAAAAAGGTCCGCCAGTTCGTGACGCCCGAGGGCGTCGACCTC
GAACTGCGCATCGCCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Chromate Reductase

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL
DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG
RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL
GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT
MLRYAIGTLMLLLWLAYYYIPRRGDAA

Sequences:

>Translated_347_residues
MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL
DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG
RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL
GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT
MLRYAIGTLMLLLWLAYYYIPRRGDAA
>Mature_347_residues
MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL
DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG
RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL
GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT
MLRYAIGTLMLLLWLAYYYIPRRGDAA

Specific function: Unknown

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37698; Mature: 37698

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLY
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RATLSSLSIARATSLDKALLDHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHH
WKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASGRDPRASAEYLQSTLGQGEAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
AGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL
CCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVI
CCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHHHHH
LMLLAAGLLEGFGRQLITDTMLRYAIGTLMLLLWLAYYYIPRRGDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLY
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RATLSSLSIARATSLDKALLDHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHH
WKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASGRDPRASAEYLQSTLGQGEAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
AGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL
CCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVI
CCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHHHHH
LMLLAAGLLEGFGRQLITDTMLRYAIGTLMLLLWLAYYYIPRRGDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA