| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488444
Identifier: 103488444
GI number: 103488444
Start: 3111345
End: 3112388
Strand: Direct
Name: 103488444
Synonym: Sala_2967
Alternate gene names: NA
Gene position: 3111345-3112388 (Clockwise)
Preceding gene: 103488443
Following gene: 103488445
Centisome position: 93.01
GC content: 66.28
Gene sequence:
>1044_bases GTGATCCCGCCGCCGCCCGCCATGCCGCGCGCGCTTGATGCGCCGAGTTTTTCGACGAGCCGCTTTCGCGCCGAGCGCGA GGGTGACTGGATCGCCTTCGACCGGCTGCTGACCCGATTGGAAAAAAAGGGTGCGAAAGGGCTGTCGAGCGAGGAACTGC TGCAACTGCCGGTCCTCTATCGCGCGACCCTGTCGTCGCTGTCGATCGCGCGCGCGACCAGCCTCGACAAGGCGCTGCTC GATCATCTCGAGGCGCTGTCGATCCGCGGCTATTTCCTCGTCTATGGCGTGCGCGAGAGCCGCTGGAGCCGCTTGCGCCG CTTCTTCCTCTACGACTGGCCGGCGGCGGTGCGGGCGGTGTGGAAGGAAACGGTGGTCATCGCGCTGATCATCCTGCTCG GCGCCCTGACCAGCTATTCGCTCGTGTCGAGCAACCCCGAATGGTACTATAATTTCGTCGACGAAGGCATGGCATCGGGG CGCGACCCGCGCGCCAGCGCCGAATATCTGCAATCGACGCTCGGCCAAGGCGAGGCGGCGGCGGGCAAGGGCGAAAGCGG CCTTCATATCTTCGCGACCTATTTGTTCACCCACAACAGCCGTGTGTCGATCCTCTCCTTCGCGCTCGGCTTCGCCTTTG GCGTGCCGACGATGATGCTGGAGTTCTACCAGGGCATCGGGCTCGGCGCGATGATGGCGGTCTTTTCGGCCAAGGGGCTG GGGGTTGATTTCGGCGGCTGGCTGTTCATCCATGGCACGACCGAATTATTCGCGGCGGCGCTGGCGGGCGCGGCGGGACT GCGCATCGGTGCCGCGGTCGTCTTTCCCGGCGCGCGCGGGCGGCTGGAGGCGGCGGCCGCGGCGGGGCGCACCGCGGGCA AGGTGATGATCGGCGTCATTCTGATGCTGCTCGCCGCGGGCCTGCTCGAAGGCTTTGGGCGCCAGCTCATCACCGACACG ATGCTGCGCTATGCGATCGGAACGCTGATGCTGCTGCTCTGGCTGGCCTATTATTATATCCCGCGGCGCGGGGACGCGGC GTGA
Upstream 100 bases:
>100_bases GGCTCCGGCGGCTCGGCGCCGACGTGATCGAGGTGCCCGCCGATGACATGGCGGCGCGCGCGGTCGAGGCCTATCTGGGC ATCAAGCGGCAGGGCAGCCT
Downstream 100 bases:
>100_bases CCGCGGCTGCCAACGCCAAGGCACGCGCCGCGAGGGCCAAAAAGGTCCGCCAGTTCGTGACGCCCGAGGGCGTCGACCTC GAACTGCGCATCGCCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Chromate Reductase
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT MLRYAIGTLMLLLWLAYYYIPRRGDAA
Sequences:
>Translated_347_residues MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT MLRYAIGTLMLLLWLAYYYIPRRGDAA >Mature_347_residues MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLYRATLSSLSIARATSLDKALL DHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAVWKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASG RDPRASAEYLQSTLGQGEAAAGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVILMLLAAGLLEGFGRQLITDT MLRYAIGTLMLLLWLAYYYIPRRGDAA
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37698; Mature: 37698
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLY CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RATLSSLSIARATSLDKALLDHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHH WKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASGRDPRASAEYLQSTLGQGEAA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC AGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL CCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVI CCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHHHHH LMLLAAGLLEGFGRQLITDTMLRYAIGTLMLLLWLAYYYIPRRGDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIPPPPAMPRALDAPSFSTSRFRAEREGDWIAFDRLLTRLEKKGAKGLSSEELLQLPVLY CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RATLSSLSIARATSLDKALLDHLEALSIRGYFLVYGVRESRWSRLRRFFLYDWPAAVRAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHH WKETVVIALIILLGALTSYSLVSSNPEWYYNFVDEGMASGRDPRASAEYLQSTLGQGEAA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC AGKGESGLHIFATYLFTHNSRVSILSFALGFAFGVPTMMLEFYQGIGLGAMMAVFSAKGL CCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC GVDFGGWLFIHGTTELFAAALAGAAGLRIGAAVVFPGARGRLEAAAAAGRTAGKVMIGVI CCCCCCEEEEECHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHCCCHHHHHHHHHH LMLLAAGLLEGFGRQLITDTMLRYAIGTLMLLLWLAYYYIPRRGDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA