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The map label for this gene is fliP [H]

Identifier: 103488403

GI number: 103488403

Start: 3072781

End: 3073551

Strand: Reverse

Name: fliP [H]

Synonym: Sala_2926

Alternate gene names: 103488403

Gene position: 3073551-3072781 (Counterclockwise)

Preceding gene: 103488404

Following gene: 103488402

Centisome position: 91.88

GC content: 63.94

Gene sequence:

>771_bases
ATGTCGATTGACGGCCGCTTCTGGCTGCGCGCCGCGGCGCTGACTGGCGGGGCAGGGCTGCTTTGCGCCGCGACGCCGGC
GTTCGCGCAGGCCGCCGACGGGCTCAGCCGCGCGGTGAACGAGATCGGCGGCGACGGACGGCCGCTGAGCCTGTCGCTCC
AGATCCTCGTCCTGATGAGCCTCTTGACGGTGCTGCCGTCGCTGCTGCTCATGATGACCAGCTTCACGCGCATCATCATC
GTGCTGTCGATCCTGCGCCACGCGCTCGGGCTGCAACAGACGCCGCCCAACCAGGTGCTCGTGGGTCTCAGCCTCTTTCT
CTCGCTCTTCGTGATGCAGCCCGTCATCAGCGAAGTGAACCGCGTCGCGATCGAACCTTATGGCCAGGAACAGATCGACA
TCGGCGAGGCGGTGTCGCGTTCGGGCGACGCGCTCCACGGCTTCATGATGAAACAGACGCGCAAGACCGACCTGATGATG
TTCGCGAAGATCGCCAGGGCGCCGGCCTATGCCAGCCCCAAGGACGTGCCCTTTTCGATCCTGCTTCCCGCCTTTGTCAC
CAGCGAGCTCAAGACCGCCTTCCAGATCGGCTTCCTCATCTTCCTGCCCTTTCTCGTCATCGACCTGATCGTCGCCTCGG
CGCTGATGTCCTTGGGTATGATGATGCTGTCGCCGACGATCATCTCGATGCCCTTCAAGCTGCTGCTTTTCGTTCTCGTC
GACGGCTGGGCGCTGACGATGGGTTCGCTCGCCGCCTCCTTCGGAACATAG

Upstream 100 bases:

>100_bases
TCGAAACTCGCGGTCGTCGAGTTCGCCGGGCAGCGCATCCTCGTCGCCGTGTCACGGAACGGCATCACGCGGATCGCCGA
CGACGCGCAGGGGGATTTCC

Downstream 100 bases:

>100_bases
GGGCAGGGCGCAATGGAAACCGACTATTTCATTGGCATGGCGCAGCAATCCTTGTGGATTCTTGCGCTCGCATCGGCGCC
GCTGCTGCTGCCCGTGCTCA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSIDGRFWLRAAALTGGAGLLCAATPAFAQAADGLSRAVNEIGGDGRPLSLSLQILVLMSLLTVLPSLLLMMTSFTRIII
VLSILRHALGLQQTPPNQVLVGLSLFLSLFVMQPVISEVNRVAIEPYGQEQIDIGEAVSRSGDALHGFMMKQTRKTDLMM
FAKIARAPAYASPKDVPFSILLPAFVTSELKTAFQIGFLIFLPFLVIDLIVASALMSLGMMMLSPTIISMPFKLLLFVLV
DGWALTMGSLAASFGT

Sequences:

>Translated_256_residues
MSIDGRFWLRAAALTGGAGLLCAATPAFAQAADGLSRAVNEIGGDGRPLSLSLQILVLMSLLTVLPSLLLMMTSFTRIII
VLSILRHALGLQQTPPNQVLVGLSLFLSLFVMQPVISEVNRVAIEPYGQEQIDIGEAVSRSGDALHGFMMKQTRKTDLMM
FAKIARAPAYASPKDVPFSILLPAFVTSELKTAFQIGFLIFLPFLVIDLIVASALMSLGMMMLSPTIISMPFKLLLFVLV
DGWALTMGSLAASFGT
>Mature_255_residues
SIDGRFWLRAAALTGGAGLLCAATPAFAQAADGLSRAVNEIGGDGRPLSLSLQILVLMSLLTVLPSLLLMMTSFTRIIIV
LSILRHALGLQQTPPNQVLVGLSLFLSLFVMQPVISEVNRVAIEPYGQEQIDIGEAVSRSGDALHGFMMKQTRKTDLMMF
AKIARAPAYASPKDVPFSILLPAFVTSELKTAFQIGFLIFLPFLVIDLIVASALMSLGMMMLSPTIISMPFKLLLFVLVD
GWALTMGSLAASFGT

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=236, Percent_Identity=54.6610169491525, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27476; Mature: 27345

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIDGRFWLRAAALTGGAGLLCAATPAFAQAADGLSRAVNEIGGDGRPLSLSLQILVLMS
CCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLTVLPSLLLMMTSFTRIIIVLSILRHALGLQQTPPNQVLVGLSLFLSLFVMQPVISEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVAIEPYGQEQIDIGEAVSRSGDALHGFMMKQTRKTDLMMFAKIARAPAYASPKDVPFSI
HHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LLPAFVTSELKTAFQIGFLIFLPFLVIDLIVASALMSLGMMMLSPTIISMPFKLLLFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWALTMGSLAASFGT
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9683497 [H]