Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488404

Identifier: 103488404

GI number: 103488404

Start: 3073541

End: 3073819

Strand: Reverse

Name: 103488404

Synonym: Sala_2927

Alternate gene names: NA

Gene position: 3073819-3073541 (Counterclockwise)

Preceding gene: 103488405

Following gene: 103488403

Centisome position: 91.89

GC content: 66.67

Gene sequence:

>279_bases
ATGCTCGAATATATCCTTCGCTTGGCTCTCCTGCTGCCGCTGGTCGGGGCGATGGCGTGGGGCAGCCTGTGGCTGTGGAA
GCGCGTCCAGATGGGCGTGCCGCTCGTCGGCGGCAATGCGAAGCCGCGTGCGGTCGAGATGGTCGATGTGCTGCCGCTCG
GCCCCGGATCGAAACTCGCGGTCGTCGAGTTCGCCGGGCAGCGCATCCTCGTCGCCGTGTCACGGAACGGCATCACGCGG
ATCGCCGACGACGCGCAGGGGGATTTCCATGTCGATTGA

Upstream 100 bases:

>100_bases
CGAAGGGCGAGATCGTCAGCGTCGATGGCCGCTACGGCATCCAGGTCGCCGAAGTCGTCGCGCCCGCGCGCGGCCTCGAA
GGTTTCGAGCGGAGAGCCTG

Downstream 100 bases:

>100_bases
CGGCCGCTTCTGGCTGCGCGCCGCGGCGCTGACTGGCGGGGCAGGGCTGCTTTGCGCCGCGACGCCGGCGTTCGCGCAGG
CCGCCGACGGGCTCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLEYILRLALLLPLVGAMAWGSLWLWKRVQMGVPLVGGNAKPRAVEMVDVLPLGPGSKLAVVEFAGQRILVAVSRNGITR
IADDAQGDFHVD

Sequences:

>Translated_92_residues
MLEYILRLALLLPLVGAMAWGSLWLWKRVQMGVPLVGGNAKPRAVEMVDVLPLGPGSKLAVVEFAGQRILVAVSRNGITR
IADDAQGDFHVD
>Mature_92_residues
MLEYILRLALLLPLVGAMAWGSLWLWKRVQMGVPLVGGNAKPRAVEMVDVLPLGPGSKLAVVEFAGQRILVAVSRNGITR
IADDAQGDFHVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9949; Mature: 9949

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEYILRLALLLPLVGAMAWGSLWLWKRVQMGVPLVGGNAKPRAVEMVDVLPLGPGSKLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCEE
VVEFAGQRILVAVSRNGITRIADDAQGDFHVD
EEEECCCEEEEEECCCCCEECCCCCCCCEECC
>Mature Secondary Structure
MLEYILRLALLLPLVGAMAWGSLWLWKRVQMGVPLVGGNAKPRAVEMVDVLPLGPGSKLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCEE
VVEFAGQRILVAVSRNGITRIADDAQGDFHVD
EEEECCCEEEEEECCCCCEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA