| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is flgG [H]
Identifier: 103488389
GI number: 103488389
Start: 3060442
End: 3061227
Strand: Direct
Name: flgG [H]
Synonym: Sala_2912
Alternate gene names: 103488389
Gene position: 3060442-3061227 (Clockwise)
Preceding gene: 103488388
Following gene: 103488390
Centisome position: 91.49
GC content: 65.9
Gene sequence:
>786_bases ATGAGCCTCGGCGCCTTGCACGTCGCACGAACCGGTCTGGATGCGCAAAGCTTTCGGATGCAGGTGATCGCGAACAACCT CGCCAACGTCAACACCACGGGCTTCAAGCGCGATCGCGCGAGCTTTGAGACTTTGAGTTATCAATTGATGACGCAGGCCG GCGCGCCGTCGACGGCGGAAAACCGCTATGCGACGGGGCTGAACCTCGGCACCGGCGTCGCCTTGAACGGCACCGCGCGC ATCGACACGCAGGGGACGTTCCAGACGACGGGCAACGGGCTCGACGTCGCGATCGACGGCGCGGGATATTTCCAGGTCGA ACTGCCCGACGGGCGCATCGGTTATACCCGCGCGGGCAATTTCGGCCGCGCCCCCGACGGCACGATCGTCACCCCCGACG GCAAGCCGCTGACCCCCGCGATCCAGATTCCCGAAGACGCCGGCAATGTGTCGATCGGGCTCGACGGCACCGTGTCGGCG ACCGCCGCCGACGGCACCGCGCTCGAACTCGGCCGCATCGAGATTGCGCGCTTTTCGAACCCCGCCGGGCTCCAGGCGAT CGGCGGCAACATGCTCGTCGAGACGCAGGCCTCGGGCGCCCCGCTGGTCGGCGGCGCGGGCGAGGAAGGGCGCGGCACGC TGCGCGGCGGGATGCTCGAGGGATCGAACGTCAATGTCGTCGAAGAGCTTGTCGACATGATCGAAACGCAGCGCGCCTAT GAGGTCAATTCGAAGATGATCTCGGCGACCGACGAGATGATGAAAAATGCGTCGCAGACTCTCTGA
Upstream 100 bases:
>100_bases GCCGCAGCTGGGACACCCAATTGAAGATGATCGGCGACGTGCGCGACATGGACAGCGCAACCGCCAATCTGATGCAGCTT CCTCGTTAGGAGATAGAGAC
Downstream 100 bases:
>100_bases ACTGGCGATGCTGGCCCTCGCGCTCGCGCCCGTCGCGGTGCAGGCGAAGGACAAGCTGCCGCCCGATGCCTTTTCGGCGA CGATGCCGCTGCCGCCGCCC
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSLGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENRYATGLNLGTGVALNGTAR IDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGNFGRAPDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSA TAADGTALELGRIEIARFSNPAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAY EVNSKMISATDEMMKNASQTL
Sequences:
>Translated_261_residues MSLGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENRYATGLNLGTGVALNGTAR IDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGNFGRAPDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSA TAADGTALELGRIEIARFSNPAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAY EVNSKMISATDEMMKNASQTL >Mature_260_residues SLGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENRYATGLNLGTGVALNGTARI DTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGNFGRAPDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSAT AADGTALELGRIEIARFSNPAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAYE VNSKMISATDEMMKNASQTL
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=258, Percent_Identity=49.2248062015504, Blast_Score=236, Evalue=9e-64, Organism=Escherichia coli, GI1787317, Length=264, Percent_Identity=31.4393939393939, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787316, Length=112, Percent_Identity=40.1785714285714, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27016; Mature: 26884
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAE CCCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCCCC NRYATGLNLGTGVALNGTARIDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGN CCEECCCCCCCCEEECCEEEECCCCCEEECCCCEEEEEECCCEEEEECCCCCEEEEECCC FGRAPDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSATAADGTALELGRIEIARFSN CCCCCCCCEECCCCCCCCCEEECCCCCCCEEEECCCCEEEECCCCCEEEECEEEEEECCC PAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAY CCCCEEECCCEEEEECCCCCCEECCCCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHH EVNSKMISATDEMMKNASQTL HHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAE CCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCCCC NRYATGLNLGTGVALNGTARIDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGN CCEECCCCCCCCEEECCEEEECCCCCEEECCCCEEEEEECCCEEEEECCCCCEEEEECCC FGRAPDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSATAADGTALELGRIEIARFSN CCCCCCCCEECCCCCCCCCEEECCCCCCCEEEECCCCEEEECCCCCEEEECEEEEEECCC PAGLQAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAY CCCCEEECCCEEEEECCCCCCEECCCCCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHH EVNSKMISATDEMMKNASQTL HHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]