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The map label for this gene is flgH [H]

Identifier: 103488390

GI number: 103488390

Start: 3061208

End: 3061867

Strand: Direct

Name: flgH [H]

Synonym: Sala_2913

Alternate gene names: 103488390

Gene position: 3061208-3061867 (Clockwise)

Preceding gene: 103488389

Following gene: 103488391

Centisome position: 91.51

GC content: 67.12

Gene sequence:

>660_bases
ATGCGTCGCAGACTCTCTGAACTGGCGATGCTGGCCCTCGCGCTCGCGCCCGTCGCGGTGCAGGCGAAGGACAAGCTGCC
GCCCGATGCCTTTTCGGCGACGATGCCGCTGCCGCCGCCCCCCCCACCTGCGAACGGCTCGATCTTTCAGGGCGCCTATG
TGCCGCTGACGTCGGGCGGCCGCGCGGGGCAGGTCGGCGACATATTGACGATCCAGCTCGTCGAGCGCACCGCGGCGACC
AAAAGCAACGCCGCGGGCACCCAGCGCGACGGCGACATCGGCCTCAGCCCGCCGACCACCGGTCCGCTTTCCTTCTTCAA
CCCCAGCGATATCGGCATGGGCGGCGGTCAGCAGTTCAAGGGCAAGGGCGAAGCGTCGCAATCGAACGCGCTGTCGGGCG
AGGTCAGCGTGACCGTTGCCGCCGTCTATCCCAATGGTACGATGCTGGTGAAGGGCGAAAAGTTCCTGACGCTCAACCGC
GGCGACGAGCGCGTCCAGATTTCGGGGATCGTCCGCGCTATCGACATCAGCCCCGACAACCGCATCCTGTCGACGCGCGT
CGCCAACGCGACGATCCGCTATGTCGGCAAGGGCGAAATCGCGCGCGCGAGCCGTCAGGGCTGGCTGCAGCGCTTCTTCT
CGATGATCAGCCCCTTCTGA

Upstream 100 bases:

>100_bases
AACGTCAATGTCGTCGAAGAGCTTGTCGACATGATCGAAACGCAGCGCGCCTATGAGGTCAATTCGAAGATGATCTCGGC
GACCGACGAGATGATGAAAA

Downstream 100 bases:

>100_bases
ATAGAGGAAATGCACGTGATCCAGCGTCCGATCCTGTTCGCGCTTTTCGCGCTCCTGTTCATGGGCCTCGCCTTCTCGGC
GCCCGCGCACGCCGAGCGCA

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRRRLSELAMLALALAPVAVQAKDKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGGRAGQVGDILTIQLVERTAAT
KSNAAGTQRDGDIGLSPPTTGPLSFFNPSDIGMGGGQQFKGKGEASQSNALSGEVSVTVAAVYPNGTMLVKGEKFLTLNR
GDERVQISGIVRAIDISPDNRILSTRVANATIRYVGKGEIARASRQGWLQRFFSMISPF

Sequences:

>Translated_219_residues
MRRRLSELAMLALALAPVAVQAKDKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGGRAGQVGDILTIQLVERTAAT
KSNAAGTQRDGDIGLSPPTTGPLSFFNPSDIGMGGGQQFKGKGEASQSNALSGEVSVTVAAVYPNGTMLVKGEKFLTLNR
GDERVQISGIVRAIDISPDNRILSTRVANATIRYVGKGEIARASRQGWLQRFFSMISPF
>Mature_219_residues
MRRRLSELAMLALALAPVAVQAKDKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGGRAGQVGDILTIQLVERTAAT
KSNAAGTQRDGDIGLSPPTTGPLSFFNPSDIGMGGGQQFKGKGEASQSNALSGEVSVTVAAVYPNGTMLVKGEKFLTLNR
GDERVQISGIVRAIDISPDNRILSTRVANATIRYVGKGEIARASRQGWLQRFFSMISPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=220, Percent_Identity=42.2727272727273, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 23037; Mature: 23037

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRLSELAMLALALAPVAVQAKDKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGG
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCC
RAGQVGDILTIQLVERTAATKSNAAGTQRDGDIGLSPPTTGPLSFFNPSDIGMGGGQQFK
CCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKGEASQSNALSGEVSVTVAAVYPNGTMLVKGEKFLTLNRGDERVQISGIVRAIDISPDN
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEEEEEEECCCC
RILSTRVANATIRYVGKGEIARASRQGWLQRFFSMISPF
CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRRLSELAMLALALAPVAVQAKDKLPPDAFSATMPLPPPPPPANGSIFQGAYVPLTSGG
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCC
RAGQVGDILTIQLVERTAATKSNAAGTQRDGDIGLSPPTTGPLSFFNPSDIGMGGGQQFK
CCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKGEASQSNALSGEVSVTVAAVYPNGTMLVKGEKFLTLNRGDERVQISGIVRAIDISPDN
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEEEEEEECCCC
RILSTRVANATIRYVGKGEIARASRQGWLQRFFSMISPF
CEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA