Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is narP [C]

Identifier: 103488375

GI number: 103488375

Start: 3050502

End: 3051002

Strand: Direct

Name: narP [C]

Synonym: Sala_2898

Alternate gene names: 103488375

Gene position: 3050502-3051002 (Clockwise)

Preceding gene: 103488374

Following gene: 103488376

Centisome position: 91.19

GC content: 52.69

Gene sequence:

>501_bases
GTGATGCTCTATTCCAACCCCGTGCAAGGCGATCCAGACAATTACATAAGCCTGCTTTCGGCCGCGCAAATCGAAACGTT
GCGGCACGTTTACGAGCATAAAAATTCCAAACAGATCGCGCGGATCATGAATGTTTCGCCGCACACCGTGGACGAGCGGG
TACGACGGGTTCTAAAAAAGCTTAATGTTTCCAACAGAATAGAAGCTGCCCGGATATTGGCTGTTAACGGTGTCTTCGAT
CATGTTACCCCTTATCAGCCTTTGACATATCAATTGATCGACCTAGGCGACGATGCGCCCCCCGCCGATGCCGAAAGGGG
GCGCAGTGCGTTTCGGCGGCTATTCGATATCGGTTCGCCTTTTCCTACCGCGTCCCAGCCGGCCAACCGGCATGGGTTGA
TGGAAAGGATTATCTGGCCGATTCTCATCGCATTTGCGACGATCTTGGCTTTTTCCGCCCTCTATTCGATCCTTGTCGGA
CTTGGTCGTGTTCTGACCTGA

Upstream 100 bases:

>100_bases
CCCCCCTGTTACGGTGACTCGTTGTCTGCGAGCGGCAATGTCACCGTAACATGGCTGGACGGCAGATGAATTTGACCCCT
GCCGACCTTGATTTCGACTC

Downstream 100 bases:

>100_bases
ATGTTCGAACCGAATGCTGCGGGGGGGAAACCGGTAGCATTCTTTTTCAAGGAAAAAGTTAATGCTGAACGAACGAGTGT
CTGCAGCCAAGAAGATCGCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD
HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG
LGRVLT

Sequences:

>Translated_166_residues
MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD
HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG
LGRVLT
>Mature_166_residues
MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKKLNVSNRIEAARILAVNGVFD
HVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSPFPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVG
LGRVLT

Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18607; Mature: 18607

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
LNVSNRIEAARILAVNGVFDHVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSP
CCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
FPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVGLGRVLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLYSNPVQGDPDNYISLLSAAQIETLRHVYEHKNSKQIARIMNVSPHTVDERVRRVLKK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
LNVSNRIEAARILAVNGVFDHVTPYQPLTYQLIDLGDDAPPADAERGRSAFRRLFDIGSP
CCCCHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
FPTASQPANRHGLMERIIWPILIAFATILAFSALYSILVGLGRVLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA