Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488368

Identifier: 103488368

GI number: 103488368

Start: 3042057

End: 3042962

Strand: Reverse

Name: 103488368

Synonym: Sala_2891

Alternate gene names: NA

Gene position: 3042962-3042057 (Counterclockwise)

Preceding gene: 103488369

Following gene: 103488367

Centisome position: 90.97

GC content: 71.63

Gene sequence:

>906_bases
ATGATCATCCCCCGCGTTCCCGTCCAGCACCGCCGCCTGCTCCCCGACCGCCGCCTGTCGGGGCCGACGCCGTGGATCAT
CGCAATCCTGATGATGCTGACCCTGCTCGCCGCCGCCGCGGGGATCGGGCTCGCGCGATCGGCCAATGCGATCGGCGATG
CGATTGCGGGCCGCGTCACCGTCCAGATCGTCACCGCCAATCCCGTGACGCGCGCCGCGCAGGCGGCGGCGCTCCGCCGC
GCCGCCAGCGCCGCCCCCTTCGTCCGCGCGGCGCGCGCGGTCGAGCGCGAGGAATTGCAGGCGATGCTCGGCCAATGGTT
CGGCCGCACCGAAGGCGACGACCCGGTGCTGGCGTCACTCCCGCTCCCGGCGCTTGTCGACATCGACTTCGTCGGCGACG
ACCGCGCGGGAGCGATGAAGGCGCTCGAAACACTCGTCGCGCGCGAGGCGCCGGGCGCGCGGATCATCGCCCATGCCGAA
TGGCTAAGTCCCGTCGCGCGGCTGATCCGTTCGCTCGCGTGGATCGCCGCCGGGCTCGTCGTCCTGATGGCGCTCGCCAG
CGCCGCGGTGGTGATCATGACCGCGCGCGCCGCGCTCGGCACGCATTTTGCGACGATCGAGATGCTGCACCTGATCGGCG
CGACCGACCGCCAGATCGCGCGACTGTTCCAGCGCCGGATCGCGATCGACACCGCCTATGGCATTGCGCTCGGCAGTCTG
GTCGCGGCGGCGATCATGCTGCTCGTCGGCTGGCAATGGTCGGGAGTGACCGCCGGGCTCGCCGCGACCGCCTCGCTTGG
CGTCACCGGCTGGGCGCTCTTGCTGGCGCTGCCGCTATTGGCTATCGCGCTCGCTGCCCTGACGGCGCGCCAGACGCTGC
TCGCCGCGCTGAAGAAGATGCTATGA

Upstream 100 bases:

>100_bases
CGCATCGAAAATGCGCAGATGATGCGGCTCGAAAAAGGGCGCCTGTCCGACCCCACCGGGGCGCTGCGCTATCCGCCGGC
GAACAGGGCGTGATTTGGGC

Downstream 100 bases:

>100_bases
TCAAGCGCCTGATCTCGCTGCTGTTCCTCGTCTGGGTGCTGGGCTTCGCCTGGTTCGCGCTGCTCCTGCCGCTGCCCGCG
CCGCCGCAGAAGACGGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR
AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE
WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL
VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML

Sequences:

>Translated_301_residues
MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR
AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE
WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL
VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML
>Mature_301_residues
MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR
AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE
WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL
VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML

Specific function: Unknown

COG id: COG2177

COG function: function code D; Cell division protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31525; Mature: 31525

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVT
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEE
VQIVTANPVTRAAQAAALRRAASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASL
EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
PLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAEWLSPVARLIRSLAWIAAGLV
CCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
VLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKM
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
L
C
>Mature Secondary Structure
MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVT
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEE
VQIVTANPVTRAAQAAALRRAASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASL
EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
PLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAEWLSPVARLIRSLAWIAAGLV
CCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
VLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKM
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA