| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488368
Identifier: 103488368
GI number: 103488368
Start: 3042057
End: 3042962
Strand: Reverse
Name: 103488368
Synonym: Sala_2891
Alternate gene names: NA
Gene position: 3042962-3042057 (Counterclockwise)
Preceding gene: 103488369
Following gene: 103488367
Centisome position: 90.97
GC content: 71.63
Gene sequence:
>906_bases ATGATCATCCCCCGCGTTCCCGTCCAGCACCGCCGCCTGCTCCCCGACCGCCGCCTGTCGGGGCCGACGCCGTGGATCAT CGCAATCCTGATGATGCTGACCCTGCTCGCCGCCGCCGCGGGGATCGGGCTCGCGCGATCGGCCAATGCGATCGGCGATG CGATTGCGGGCCGCGTCACCGTCCAGATCGTCACCGCCAATCCCGTGACGCGCGCCGCGCAGGCGGCGGCGCTCCGCCGC GCCGCCAGCGCCGCCCCCTTCGTCCGCGCGGCGCGCGCGGTCGAGCGCGAGGAATTGCAGGCGATGCTCGGCCAATGGTT CGGCCGCACCGAAGGCGACGACCCGGTGCTGGCGTCACTCCCGCTCCCGGCGCTTGTCGACATCGACTTCGTCGGCGACG ACCGCGCGGGAGCGATGAAGGCGCTCGAAACACTCGTCGCGCGCGAGGCGCCGGGCGCGCGGATCATCGCCCATGCCGAA TGGCTAAGTCCCGTCGCGCGGCTGATCCGTTCGCTCGCGTGGATCGCCGCCGGGCTCGTCGTCCTGATGGCGCTCGCCAG CGCCGCGGTGGTGATCATGACCGCGCGCGCCGCGCTCGGCACGCATTTTGCGACGATCGAGATGCTGCACCTGATCGGCG CGACCGACCGCCAGATCGCGCGACTGTTCCAGCGCCGGATCGCGATCGACACCGCCTATGGCATTGCGCTCGGCAGTCTG GTCGCGGCGGCGATCATGCTGCTCGTCGGCTGGCAATGGTCGGGAGTGACCGCCGGGCTCGCCGCGACCGCCTCGCTTGG CGTCACCGGCTGGGCGCTCTTGCTGGCGCTGCCGCTATTGGCTATCGCGCTCGCTGCCCTGACGGCGCGCCAGACGCTGC TCGCCGCGCTGAAGAAGATGCTATGA
Upstream 100 bases:
>100_bases CGCATCGAAAATGCGCAGATGATGCGGCTCGAAAAAGGGCGCCTGTCCGACCCCACCGGGGCGCTGCGCTATCCGCCGGC GAACAGGGCGTGATTTGGGC
Downstream 100 bases:
>100_bases TCAAGCGCCTGATCTCGCTGCTGTTCCTCGTCTGGGTGCTGGGCTTCGCCTGGTTCGCGCTGCTCCTGCCGCTGCCCGCG CCGCCGCAGAAGACGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML
Sequences:
>Translated_301_residues MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML >Mature_301_residues MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVTVQIVTANPVTRAAQAAALRR AASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASLPLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAE WLSPVARLIRSLAWIAAGLVVLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKML
Specific function: Unknown
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31525; Mature: 31525
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVT CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEE VQIVTANPVTRAAQAAALRRAASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASL EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC PLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAEWLSPVARLIRSLAWIAAGLV CCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH VLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH L C >Mature Secondary Structure MIIPRVPVQHRRLLPDRRLSGPTPWIIAILMMLTLLAAAAGIGLARSANAIGDAIAGRVT CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEE VQIVTANPVTRAAQAAALRRAASAAPFVRAARAVEREELQAMLGQWFGRTEGDDPVLASL EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC PLPALVDIDFVGDDRAGAMKALETLVAREAPGARIIAHAEWLSPVARLIRSLAWIAAGLV CCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH VLMALASAAVVIMTARAALGTHFATIEMLHLIGATDRQIARLFQRRIAIDTAYGIALGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAAAIMLLVGWQWSGVTAGLAATASLGVTGWALLLALPLLAIALAALTARQTLLAALKKM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA