| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is metX [H]
Identifier: 103488363
GI number: 103488363
Start: 3037204
End: 3038325
Strand: Reverse
Name: metX [H]
Synonym: Sala_2886
Alternate gene names: 103488363
Gene position: 3038325-3037204 (Counterclockwise)
Preceding gene: 103488366
Following gene: 103488362
Centisome position: 90.83
GC content: 67.2
Gene sequence:
>1122_bases ATGGCGAGCCGGTTGCACGAAATCCAGCATCAAAGCGTGACGATTCAGGCGCCGCTGCCGCTCGACAGCGGACAAAGCCT GCCTTCGGTGACGATCGCCTGGCAAAGCTATGGCGCGCTCAACGCCGACAAGTCGAACGCCGTGCTCATCTGCCACGCGC TCACCGGCGACCAATATGTCGCGAGCGACCATCCCGCGACGGGCAAGCCCGGCTGGTGGGCGCGCATGGTCGGTCCCGGC AAGCCGATCGACACCGACCGTTTCCACGTCATTTGCGCCAATGTGCTCGGCAGCTGCATGGGGTCGAGCGGGCCGGCGAG CCCCGACGCGGCCACCGGCGCGCCGCTCGGCATGGCCTTTCCCGTCATCACCATCGGTGACATGGTGCGCGCGCAGGCGA TGCTGCTCGATCATCTCGGTATCGCGCGGCTGCACGCGGTGGTCGGCGGATCGATGGGCGGGATGCAGGCGCTCGCCTGG GCCGCGGCCTTTCCCGATCGGCTCGGCTCGGCGATCGTCATCGCCAGCGCGGCACGCCATTCGGCACAGAATATCGCGTT TCACGAGGTCGGGCGCCAGGCGATCATGGCCGACCCCGACTGGCAGGACGGCCAATATTATGGCAGCGCGCGCGCGCCGA CCAAGGGGCTCGCGGTCGCGCGGATGGCGGCGCACATCACCTATTTGTCCGAAGCCGGGCTGACCGAAAAGTTCGGCCGC CGCCTGCAGGCGCGCGCGATCAAGAGCTTTGGTTTCGATGCCGATTTTCAGGTCGAATCCTATTTGCGGCATCAGGGGCT GGCCTTCACCGACCGCTTCGACGCCAACGCCTATCTCTATATCACGCGCGCGATGGACTATTTCGACCTTGCCGAACCGC ACGATGGTCGCCTTGCGGGCGCCTTTGCGGGGGCGAAGGATGTGCGCTTCACGCTCGTCAGCTTCGACACCGACTGGCTT TACCCCACCGCCGAATCGCGCCGCATCGTCCAGGCGCTGCAAAGCGTCGGCGCGGCGGCAAGCTTCGTCGAGCTGTCGGC GCCCTTCGGGCACGACAGCTTCCTCCTCGATGTCCCCGCGCTCGACCGGATCGTCGCGGGCGCGCTCGGGGGCGGACGCT GA
Upstream 100 bases:
>100_bases ATCCTGGGCGGCTCTGCGTCGCCGCGCGAATAATCCAGCCCCCGATCTCTGCGCGCGCATCGTTGACACGCCCCCTTCGC CCGCTTAGCCCCGCCTTCCC
Downstream 100 bases:
>100_bases TGGCGCTGCGTCCCGATCTGGCGATCATCGCCGATGCCGTTCCGGCGGGGGCGCGCGTGCTCGACGTCGGCTGCGGCGAC GGCGAGTTGATGGTCGCGCT
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MASRLHEIQHQSVTIQAPLPLDSGQSLPSVTIAWQSYGALNADKSNAVLICHALTGDQYVASDHPATGKPGWWARMVGPG KPIDTDRFHVICANVLGSCMGSSGPASPDAATGAPLGMAFPVITIGDMVRAQAMLLDHLGIARLHAVVGGSMGGMQALAW AAAFPDRLGSAIVIASAARHSAQNIAFHEVGRQAIMADPDWQDGQYYGSARAPTKGLAVARMAAHITYLSEAGLTEKFGR RLQARAIKSFGFDADFQVESYLRHQGLAFTDRFDANAYLYITRAMDYFDLAEPHDGRLAGAFAGAKDVRFTLVSFDTDWL YPTAESRRIVQALQSVGAAASFVELSAPFGHDSFLLDVPALDRIVAGALGGGR
Sequences:
>Translated_373_residues MASRLHEIQHQSVTIQAPLPLDSGQSLPSVTIAWQSYGALNADKSNAVLICHALTGDQYVASDHPATGKPGWWARMVGPG KPIDTDRFHVICANVLGSCMGSSGPASPDAATGAPLGMAFPVITIGDMVRAQAMLLDHLGIARLHAVVGGSMGGMQALAW AAAFPDRLGSAIVIASAARHSAQNIAFHEVGRQAIMADPDWQDGQYYGSARAPTKGLAVARMAAHITYLSEAGLTEKFGR RLQARAIKSFGFDADFQVESYLRHQGLAFTDRFDANAYLYITRAMDYFDLAEPHDGRLAGAFAGAKDVRFTLVSFDTDWL YPTAESRRIVQALQSVGAAASFVELSAPFGHDSFLLDVPALDRIVAGALGGGR >Mature_372_residues ASRLHEIQHQSVTIQAPLPLDSGQSLPSVTIAWQSYGALNADKSNAVLICHALTGDQYVASDHPATGKPGWWARMVGPGK PIDTDRFHVICANVLGSCMGSSGPASPDAATGAPLGMAFPVITIGDMVRAQAMLLDHLGIARLHAVVGGSMGGMQALAWA AAFPDRLGSAIVIASAARHSAQNIAFHEVGRQAIMADPDWQDGQYYGSARAPTKGLAVARMAAHITYLSEAGLTEKFGRR LQARAIKSFGFDADFQVESYLRHQGLAFTDRFDANAYLYITRAMDYFDLAEPHDGRLAGAFAGAKDVRFTLVSFDTDWLY PTAESRRIVQALQSVGAAASFVELSAPFGHDSFLLDVPALDRIVAGALGGGR
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=238, Percent_Identity=38.655462184874, Blast_Score=170, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR008220 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =2.3.1.31 [H]
Molecular weight: Translated: 39669; Mature: 39538
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRLHEIQHQSVTIQAPLPLDSGQSLPSVTIAWQSYGALNADKSNAVLICHALTGDQYV CCCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEE ASDHPATGKPGWWARMVGPGKPIDTDRFHVICANVLGSCMGSSGPASPDAATGAPLGMAF ECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH PVITIGDMVRAQAMLLDHLGIARLHAVVGGSMGGMQALAWAAAFPDRLGSAIVIASAARH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCEEEEEHHHHH SAQNIAFHEVGRQAIMADPDWQDGQYYGSARAPTKGLAVARMAAHITYLSEAGLTEKFGR HHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RLQARAIKSFGFDADFQVESYLRHQGLAFTDRFDANAYLYITRAMDYFDLAEPHDGRLAG HHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEE AFAGAKDVRFTLVSFDTDWLYPTAESRRIVQALQSVGAAASFVELSAPFGHDSFLLDVPA ECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCCCEEEECCH LDRIVAGALGGGR HHHHHHHHCCCCC >Mature Secondary Structure ASRLHEIQHQSVTIQAPLPLDSGQSLPSVTIAWQSYGALNADKSNAVLICHALTGDQYV CCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCEEE ASDHPATGKPGWWARMVGPGKPIDTDRFHVICANVLGSCMGSSGPASPDAATGAPLGMAF ECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH PVITIGDMVRAQAMLLDHLGIARLHAVVGGSMGGMQALAWAAAFPDRLGSAIVIASAARH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCEEEEEHHHHH SAQNIAFHEVGRQAIMADPDWQDGQYYGSARAPTKGLAVARMAAHITYLSEAGLTEKFGR HHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RLQARAIKSFGFDADFQVESYLRHQGLAFTDRFDANAYLYITRAMDYFDLAEPHDGRLAG HHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCEEEEEEECCCHHHCCCCCCCCEEE AFAGAKDVRFTLVSFDTDWLYPTAESRRIVQALQSVGAAASFVELSAPFGHDSFLLDVPA ECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHEEEECCCCCCCCEEEECCH LDRIVAGALGGGR HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA