| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488362
Identifier: 103488362
GI number: 103488362
Start: 3036617
End: 3037204
Strand: Reverse
Name: 103488362
Synonym: Sala_2885
Alternate gene names: NA
Gene position: 3037204-3036617 (Counterclockwise)
Preceding gene: 103488363
Following gene: 103488359
Centisome position: 90.79
GC content: 68.88
Gene sequence:
>588_bases ATGGCGCTGCGTCCCGATCTGGCGATCATCGCCGATGCCGTTCCGGCGGGGGCGCGCGTGCTCGACGTCGGCTGCGGCGA CGGCGAGTTGATGGTCGCGCTCGGCGCCAAGGGTGTCGACGCGCGCGGGCTGGAGATCGATCCGGCGAATGTCACCGCGG CGATCGCGCGCGGGCAATCGGTGGTGCAGGGCGACGCGAACCGCGACCTCGCCGACTATCCCGACGGCGCGTTCGATTAT GCGATCCTGTCGCAGACGTTGCAGACGACCGAGCGCCCCGACCGCGTCGTCGAGGAACTGTTGCGCATCGCGCCGCGCGC TTTCGTGAGCTTTCCCAATTTCGCGCACTGGCGCGTGCGGCTCGCGCTCCTGTGGAACGGCCGGATGCCGGTGACGCGGC TGCTCCCCGTCGCCTGGTACGAAACGCCGAACATCCACCATGTGACGGTCAGCGATTTTCGCGACCTCGTCCGCGCGCGT GGTATCCGGGTCGAGCGTGTCTGGCACCTGTCGGGCGACAAGCCGACGAGCGACGCCGCCGCAAGCTGGCGCGCCGAACA TGCGATTTTCCTGATCGCGCGAGGCTAA
Upstream 100 bases:
>100_bases GCTTCGTCGAGCTGTCGGCGCCCTTCGGGCACGACAGCTTCCTCCTCGATGTCCCCGCGCTCGACCGGATCGTCGCGGGC GCGCTCGGGGGCGGACGCTG
Downstream 100 bases:
>100_bases GTCCCCAAGTCGCAGGCAACAGCGACGGGAGCGTAGCGGATCCGCCGCTAGTCCGCGGCCGACACCTTGTGGCGGGCCAT ATGCGGGATGAAATCCATCT
Product: methionine biosynthesis MetW
Products: NA
Alternate protein names: Methionine Biosynthesis MetW; Methionine Biosynthesis Protein; Methyltransferase; SAM-Dependent Methyltransferase; Methionine Biosynthesis MetW Protein; Homoserine O-Acetyltransferase; DNA Repair Protein RadC; MetW Protein Involved In Methionine Biosynthesis; Methionine Biosynthesis; S-Adenosylmethionine-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; SAM-Dependent Methyltransferases; Methionine Biosynthesis MetW Family Protein; Methionine Biosynthesis Protein Metw
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MALRPDLAIIADAVPAGARVLDVGCGDGELMVALGAKGVDARGLEIDPANVTAAIARGQSVVQGDANRDLADYPDGAFDY AILSQTLQTTERPDRVVEELLRIAPRAFVSFPNFAHWRVRLALLWNGRMPVTRLLPVAWYETPNIHHVTVSDFRDLVRAR GIRVERVWHLSGDKPTSDAAASWRAEHAIFLIARG
Sequences:
>Translated_195_residues MALRPDLAIIADAVPAGARVLDVGCGDGELMVALGAKGVDARGLEIDPANVTAAIARGQSVVQGDANRDLADYPDGAFDY AILSQTLQTTERPDRVVEELLRIAPRAFVSFPNFAHWRVRLALLWNGRMPVTRLLPVAWYETPNIHHVTVSDFRDLVRAR GIRVERVWHLSGDKPTSDAAASWRAEHAIFLIARG >Mature_194_residues ALRPDLAIIADAVPAGARVLDVGCGDGELMVALGAKGVDARGLEIDPANVTAAIARGQSVVQGDANRDLADYPDGAFDYA ILSQTLQTTERPDRVVEELLRIAPRAFVSFPNFAHWRVRLALLWNGRMPVTRLLPVAWYETPNIHHVTVSDFRDLVRARG IRVERVWHLSGDKPTSDAAASWRAEHAIFLIARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21354; Mature: 21222
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRPDLAIIADAVPAGARVLDVGCGDGELMVALGAKGVDARGLEIDPANVTAAIARGQS CCCCCCHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEECCCCHHHHHHCCCC VVQGDANRDLADYPDGAFDYAILSQTLQTTERPDRVVEELLRIAPRAFVSFPNFAHWRVR EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEE LALLWNGRMPVTRLLPVAWYETPNIHHVTVSDFRDLVRARGIRVERVWHLSGDKPTSDAA EEEEECCCCCHHHHCEEEEECCCCEEEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCHH ASWRAEHAIFLIARG HHCCCCEEEEEEECC >Mature Secondary Structure ALRPDLAIIADAVPAGARVLDVGCGDGELMVALGAKGVDARGLEIDPANVTAAIARGQS CCCCCHHEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEECCCCHHHHHHCCCC VVQGDANRDLADYPDGAFDYAILSQTLQTTERPDRVVEELLRIAPRAFVSFPNFAHWRVR EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEE LALLWNGRMPVTRLLPVAWYETPNIHHVTVSDFRDLVRARGIRVERVWHLSGDKPTSDAA EEEEECCCCCHHHHCEEEEECCCCEEEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCHH ASWRAEHAIFLIARG HHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA