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The map label for this gene is cirA [C]

Identifier: 103488359

GI number: 103488359

Start: 3032827

End: 3035187

Strand: Reverse

Name: cirA [C]

Synonym: Sala_2882

Alternate gene names: 103488359

Gene position: 3035187-3032827 (Counterclockwise)

Preceding gene: 103488362

Following gene: 103488352

Centisome position: 90.73

GC content: 65.18

Gene sequence:

>2361_bases
ATGCGTCCTTTCGCTCGCACGCTGCGCCGCGCCATCCTTGCCACCAGCACGCTTTCGGTGCTCGCCTTCGCTCCTGCCGC
CATCGCGCAGGACGCTGGCGTCGAACCCGCCGGTGCCAGCGAGGATAGCGGCGACAATGAAATCATCGTCACCGCGCGCC
GTCGCGACGAGCGGCTGATCGACGTGCCGGTCGCGATCACCGCCTATTCGGGTGACGCGCTGGCCAAGGCGGGCGCGATC
GACATCACCGACATCGGCGCGACGACGCCGAACACGACGCTGGAGGCGTCGCGCGGCACCAATTCGACGCTCAGCGCCTT
CATCCGCGGCGTCGGGCAGCAGGATCCGGTTTCGGGCTTCGAACAGGGCGTCGGCATCTATCTCGACGATGTATACCTCA
ACCGCCCGCAGGCCGCGGTGCTCGACATTTACGAGGTCGAGCGGATCGAGGTGCTGCGCGGGCCGCAGGGCACGCTTTAT
GGCCGCAACACGATCGGCGGCGCGGTCAAATATGTGACCAAGCCGCTGCCGCAGGAGTTTTCGCTGAGGATCAAGGGCAC
CTATGGCAGCTATGACCAGGCCGACCTGGTGGTCAGCGCCAGCGCGCCGGTCAGCGACCTGCTCCGCGTCGGCGTCGCGG
GGGCGCGGCTGTCGCGCGGCGGGTTCGGCGACAATCTGACCAACGGGCTCGAAAACTACAACAAGGACGTCTGGGCCGGG
CGCGGCACGGTCGAGCTTGGCGGCTATGGCGAGCCGGTGCTCATCCGCATTTCGGGCGATTATACCAAGGACAAGAGCGC
GCCGCGCGGCGGCCACCGCCTGATCCCCAGCCTCGCGACGGGCGCCCCCGTCCTCGACAATGTCTTCGACACCCGCGGCG
GCCTGAACGACCCCAAACAGGAGATCGAGGCCTATGGCCTCGCCATGAACGTATCCGCCGAGCTCAGCGACACGGTGACG
CTGCGGTCGATCAGCGCGTGGCGCAAGGACAAGTCGGCGACCCCGATCGATTTCGACGCGCTGCCCGCGGTCGACGTCGA
TGTCCCCGGCTTTTATTTCAACGAACAGATCAGCCAGGAACTCCAGCTGCTTTATGAGGGCGATCGCCTGAAGGGCCTGC
TCGGCTTCTATTATCTCGACGCGACCGCCGACACCTTGTTCGACGTCCGCATCTTCAACACCTTTGCCGGGCTGACCGCC
TTTACCGAGGCCGATGTCGATACCACGACCTTCGCCGTCTTCGGCGATTTCACCTATGATTTCAGCGATCAGTTCAGCCT
GTCGGTCGGCGGCCGCTACACCTGGGACAAGCGCACCGCGTCGATCCTGCGCCAGAATTATCTCGGCGGCGGATCGCCCG
TCTTCGGCGGCGCGGGCGTGCCCTTCGGCGCACCCAGCACCAATTTCGACGGCAGCCGCAAGTTCAACAAGTTCACCCCG
CGCGTCTCGCTCCAATATCAGCCGACGAGCGACCATAATTTCTACGCCAGCTATTCGCAGGGGTTCAAGGGCGGCGGCTT
CGATCCGCGCGGCGTCGGCGTCAACGCACCGGCCGCCATTCCGGGCAGCCCGACCGATGCCGAGGTCGCGTCCTTCCTGA
GCTTCCTTCCCGAACAGGTCGACAGCTATGAAGTCGGCTACAAGGGCAGCCTGATGGACGGCGCGGTCAACGTCGCGCTC
GCGGCCTTCTACGCCGATTATTCGGACGTCCAGATTCCGGGTTCGGTTGCCTGCACCGTCGGCGGCCTGCCGACTTTCTG
CGGCGTCGTCTCGAACGCGGGCAAGGCGACTTTCAAGGGGCTGGAGTTCGAAGGCCGCGCGCGCCTTGCCGAAGATATGG
CGGCGGCCGGCGATCGGCTGACGCTGTCGACCGCGCTGGGCTATATCGACGCGCAATATAAGGAATATGTCACCAACATC
GGCGGCGTACCCACCGATGTCGCCGATTTCCGCGAGGTGCAGAACACGCCGAAATGGACCGCCAGCGGCACGCTCGCCTA
TTCGACCCCGGTCGGCGACGGCGAGATCCGCTTCGGCACGACGCTGTCCTATCGCAGCAAGACCCACCAGTTCGAAATCC
CGAACCCCTATATCGACCAGAAGGGGTTTGCGCTGTGGGATGCGAGCCTGGTCTATACCGCGCCCGACGATCGCTGGAGC
CTCGGGCTGTTCGGCAAGAATCTGACGAACAAGAAGTACAAGACCTCGGGCTATACCTTCATCGTCGTCGATCCCGTAAC
GGGCGTCCCGGCCCTCGGCGCCAACGGCCTGCCGCGCTCGGCACTCGGCACCGAGGGCACGCTCACCGCCTTCTACGGCA
ACCCGCGGCAGGTTTTCGTCACGGGCACGGTCAAGTTCTGA

Upstream 100 bases:

>100_bases
CTTGGTTCAGCTTTCATTATTGACTGTGCGACGGCTTGGCAAGCTCCAGGCTCAACGAAAGCAGGGGTGGCGAGGGGCCG
CCCGTCATTGGGAGACTTTC

Downstream 100 bases:

>100_bases
CCGGCGCATTCAATGCCCAGGGGGGGGAAGGGGCGTCCATAGCGGCGCCCCTTTTTTCTGCGCAGGGGCGGCGAAATCAT
TTCCAAAGGTCAGGAAAGGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug Domain Protein; Outer Membrane Protein; Nb-Dependent Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Family Protein; NB-Dependent Siderophore Receptor; NB Dependent Receptor Protein

Number of amino acids: Translated: 786; Mature: 786

Protein sequence:

>786_residues
MRPFARTLRRAILATSTLSVLAFAPAAIAQDAGVEPAGASEDSGDNEIIVTARRRDERLIDVPVAITAYSGDALAKAGAI
DITDIGATTPNTTLEASRGTNSTLSAFIRGVGQQDPVSGFEQGVGIYLDDVYLNRPQAAVLDIYEVERIEVLRGPQGTLY
GRNTIGGAVKYVTKPLPQEFSLRIKGTYGSYDQADLVVSASAPVSDLLRVGVAGARLSRGGFGDNLTNGLENYNKDVWAG
RGTVELGGYGEPVLIRISGDYTKDKSAPRGGHRLIPSLATGAPVLDNVFDTRGGLNDPKQEIEAYGLAMNVSAELSDTVT
LRSISAWRKDKSATPIDFDALPAVDVDVPGFYFNEQISQELQLLYEGDRLKGLLGFYYLDATADTLFDVRIFNTFAGLTA
FTEADVDTTTFAVFGDFTYDFSDQFSLSVGGRYTWDKRTASILRQNYLGGGSPVFGGAGVPFGAPSTNFDGSRKFNKFTP
RVSLQYQPTSDHNFYASYSQGFKGGGFDPRGVGVNAPAAIPGSPTDAEVASFLSFLPEQVDSYEVGYKGSLMDGAVNVAL
AAFYADYSDVQIPGSVACTVGGLPTFCGVVSNAGKATFKGLEFEGRARLAEDMAAAGDRLTLSTALGYIDAQYKEYVTNI
GGVPTDVADFREVQNTPKWTASGTLAYSTPVGDGEIRFGTTLSYRSKTHQFEIPNPYIDQKGFALWDASLVYTAPDDRWS
LGLFGKNLTNKKYKTSGYTFIVVDPVTGVPALGANGLPRSALGTEGTLTAFYGNPRQVFVTGTVKF

Sequences:

>Translated_786_residues
MRPFARTLRRAILATSTLSVLAFAPAAIAQDAGVEPAGASEDSGDNEIIVTARRRDERLIDVPVAITAYSGDALAKAGAI
DITDIGATTPNTTLEASRGTNSTLSAFIRGVGQQDPVSGFEQGVGIYLDDVYLNRPQAAVLDIYEVERIEVLRGPQGTLY
GRNTIGGAVKYVTKPLPQEFSLRIKGTYGSYDQADLVVSASAPVSDLLRVGVAGARLSRGGFGDNLTNGLENYNKDVWAG
RGTVELGGYGEPVLIRISGDYTKDKSAPRGGHRLIPSLATGAPVLDNVFDTRGGLNDPKQEIEAYGLAMNVSAELSDTVT
LRSISAWRKDKSATPIDFDALPAVDVDVPGFYFNEQISQELQLLYEGDRLKGLLGFYYLDATADTLFDVRIFNTFAGLTA
FTEADVDTTTFAVFGDFTYDFSDQFSLSVGGRYTWDKRTASILRQNYLGGGSPVFGGAGVPFGAPSTNFDGSRKFNKFTP
RVSLQYQPTSDHNFYASYSQGFKGGGFDPRGVGVNAPAAIPGSPTDAEVASFLSFLPEQVDSYEVGYKGSLMDGAVNVAL
AAFYADYSDVQIPGSVACTVGGLPTFCGVVSNAGKATFKGLEFEGRARLAEDMAAAGDRLTLSTALGYIDAQYKEYVTNI
GGVPTDVADFREVQNTPKWTASGTLAYSTPVGDGEIRFGTTLSYRSKTHQFEIPNPYIDQKGFALWDASLVYTAPDDRWS
LGLFGKNLTNKKYKTSGYTFIVVDPVTGVPALGANGLPRSALGTEGTLTAFYGNPRQVFVTGTVKF
>Mature_786_residues
MRPFARTLRRAILATSTLSVLAFAPAAIAQDAGVEPAGASEDSGDNEIIVTARRRDERLIDVPVAITAYSGDALAKAGAI
DITDIGATTPNTTLEASRGTNSTLSAFIRGVGQQDPVSGFEQGVGIYLDDVYLNRPQAAVLDIYEVERIEVLRGPQGTLY
GRNTIGGAVKYVTKPLPQEFSLRIKGTYGSYDQADLVVSASAPVSDLLRVGVAGARLSRGGFGDNLTNGLENYNKDVWAG
RGTVELGGYGEPVLIRISGDYTKDKSAPRGGHRLIPSLATGAPVLDNVFDTRGGLNDPKQEIEAYGLAMNVSAELSDTVT
LRSISAWRKDKSATPIDFDALPAVDVDVPGFYFNEQISQELQLLYEGDRLKGLLGFYYLDATADTLFDVRIFNTFAGLTA
FTEADVDTTTFAVFGDFTYDFSDQFSLSVGGRYTWDKRTASILRQNYLGGGSPVFGGAGVPFGAPSTNFDGSRKFNKFTP
RVSLQYQPTSDHNFYASYSQGFKGGGFDPRGVGVNAPAAIPGSPTDAEVASFLSFLPEQVDSYEVGYKGSLMDGAVNVAL
AAFYADYSDVQIPGSVACTVGGLPTFCGVVSNAGKATFKGLEFEGRARLAEDMAAAGDRLTLSTALGYIDAQYKEYVTNI
GGVPTDVADFREVQNTPKWTASGTLAYSTPVGDGEIRFGTTLSYRSKTHQFEIPNPYIDQKGFALWDASLVYTAPDDRWS
LGLFGKNLTNKKYKTSGYTFIVVDPVTGVPALGANGLPRSALGTEGTLTAFYGNPRQVFVTGTVKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84001; Mature: 84001

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFARTLRRAILATSTLSVLAFAPAAIAQDAGVEPAGASEDSGDNEIIVTARRRDERLI
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEE
DVPVAITAYSGDALAKAGAIDITDIGATTPNTTLEASRGTNSTLSAFIRGVGQQDPVSGF
ECCEEEEEECCCHHHHCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHH
EQGVGIYLDDVYLNRPQAAVLDIYEVERIEVLRGPQGTLYGRNTIGGAVKYVTKPLPQEF
HCCCCEEEEEEEECCCCCEEEEHHHHHEEHEEECCCCCEEECCCCCHHHHHHHCCCCCCE
SLRIKGTYGSYDQADLVVSASAPVSDLLRVGVAGARLSRGGFGDNLTNGLENYNKDVWAG
EEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCEECC
RGTVELGGYGEPVLIRISGDYTKDKSAPRGGHRLIPSLATGAPVLDNVFDTRGGLNDPKQ
CCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHCCCCCCHHH
EIEAYGLAMNVSAELSDTVTLRSISAWRKDKSATPIDFDALPAVDVDVPGFYFNEQISQE
HHHHHCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
LQLLYEGDRLKGLLGFYYLDATADTLFDVRIFNTFAGLTAFTEADVDTTTFAVFGDFTYD
HHHHHCCCHHCEEEEEEEECCCCCCEEEEEHHHHHHHHHEEECCCCCCEEEEEEECEEEC
FSDQFSLSVGGRYTWDKRTASILRQNYLGGGSPVFGGAGVPFGAPSTNFDGSRKFNKFTP
CCCCEEEEECCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RVSLQYQPTSDHNFYASYSQGFKGGGFDPRGVGVNAPAAIPGSPTDAEVASFLSFLPEQV
EEEEEECCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DSYEVGYKGSLMDGAVNVALAAFYADYSDVQIPGSVACTVGGLPTFCGVVSNAGKATFKG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEECCHHHHHHHHHCCCCCEEEC
LEFEGRARLAEDMAAAGDRLTLSTALGYIDAQYKEYVTNIGGVPTDVADFREVQNTPKWT
CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE
ASGTLAYSTPVGDGEIRFGTTLSYRSKTHQFEIPNPYIDQKGFALWDASLVYTAPDDRWS
CCCEEEEECCCCCCCEEECEEEEECCCCCEEECCCCCCCCCCCEEEECEEEEECCCCCEE
LGLFGKNLTNKKYKTSGYTFIVVDPVTGVPALGANGLPRSALGTEGTLTAFYGNPRQVFV
EEECCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
TGTVKF
EEEECC
>Mature Secondary Structure
MRPFARTLRRAILATSTLSVLAFAPAAIAQDAGVEPAGASEDSGDNEIIVTARRRDERLI
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEE
DVPVAITAYSGDALAKAGAIDITDIGATTPNTTLEASRGTNSTLSAFIRGVGQQDPVSGF
ECCEEEEEECCCHHHHCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHH
EQGVGIYLDDVYLNRPQAAVLDIYEVERIEVLRGPQGTLYGRNTIGGAVKYVTKPLPQEF
HCCCCEEEEEEEECCCCCEEEEHHHHHEEHEEECCCCCEEECCCCCHHHHHHHCCCCCCE
SLRIKGTYGSYDQADLVVSASAPVSDLLRVGVAGARLSRGGFGDNLTNGLENYNKDVWAG
EEEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCEECC
RGTVELGGYGEPVLIRISGDYTKDKSAPRGGHRLIPSLATGAPVLDNVFDTRGGLNDPKQ
CCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHCCCCCCHHH
EIEAYGLAMNVSAELSDTVTLRSISAWRKDKSATPIDFDALPAVDVDVPGFYFNEQISQE
HHHHHCEEEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
LQLLYEGDRLKGLLGFYYLDATADTLFDVRIFNTFAGLTAFTEADVDTTTFAVFGDFTYD
HHHHHCCCHHCEEEEEEEECCCCCCEEEEEHHHHHHHHHEEECCCCCCEEEEEEECEEEC
FSDQFSLSVGGRYTWDKRTASILRQNYLGGGSPVFGGAGVPFGAPSTNFDGSRKFNKFTP
CCCCEEEEECCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RVSLQYQPTSDHNFYASYSQGFKGGGFDPRGVGVNAPAAIPGSPTDAEVASFLSFLPEQV
EEEEEECCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DSYEVGYKGSLMDGAVNVALAAFYADYSDVQIPGSVACTVGGLPTFCGVVSNAGKATFKG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEECCHHHHHHHHHCCCCCEEEC
LEFEGRARLAEDMAAAGDRLTLSTALGYIDAQYKEYVTNIGGVPTDVADFREVQNTPKWT
CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE
ASGTLAYSTPVGDGEIRFGTTLSYRSKTHQFEIPNPYIDQKGFALWDASLVYTAPDDRWS
CCCEEEEECCCCCCCEEECEEEEECCCCCEEECCCCCCCCCCCEEEECEEEEECCCCCEE
LGLFGKNLTNKKYKTSGYTFIVVDPVTGVPALGANGLPRSALGTEGTLTAFYGNPRQVFV
EEECCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
TGTVKF
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA