Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488235

Identifier: 103488235

GI number: 103488235

Start: 2907047

End: 2908087

Strand: Direct

Name: 103488235

Synonym: Sala_2758

Alternate gene names: NA

Gene position: 2907047-2908087 (Clockwise)

Preceding gene: 103488233

Following gene: 103488238

Centisome position: 86.9

GC content: 68.3

Gene sequence:

>1041_bases
ATGCGTCGTCATGCCCCATCCGCCCGCGCCGCGCGGTCCCTGCTGCCGCTGATCGCGGCCACCCTGGCGGTCGCGCCCGC
AGCAGCGCAGGCGTCGACCAAGCTGGACAATGTCAAGGCGGCGGCACCGGCCAAGGTCGTCTGTGACGCGGTGGCCGCTT
CCGCCGTGCCGCGCGCCCGCGACCTGTCGCAGCTGATCCTGGACGGCGCGCCGAGCGCGCTCGATCGCATCAGGATGCAG
CAGCAAGGGATAAATCGGCCCGCAACGGTCAACACCATCCCCGATCGTCGCGCGCTCGAACCCGCAAGCCGTATGCCGCT
TTCCTTCACGGCGTCGGCACCCGTCGACTGCCGCAATGCGCCGTCGCCGCCGGGCGTGACGGCCGAATGGGATGCCGGGT
CCGAACTCGGCACGCGCGCCATTCCGGTCAAGCGGACGCGCTTCGACGATCGCTGGGACCGCGTGCACCGCGCCGCGCCC
GCCGCGCTGATGCAGCGCCAGCTGCAGAGCGCCAATGCCCTGTCCGGGCTCAGCGAAACCGAGCTGCTGGCGCGCGTCAA
TCAATGGGTCAATCGCGAAATCGCCTATGTCGGGGACGATCGCAATTACCGCCGCCGTGATTTCTGGGCGACCGCTGACG
AGACGCTCGCGCGCGGCAGCGGTGATTGCGAGGATTTTGCGATCCTGAAAATGCAGATGCTGCGCGCCGCCGGGATCGAT
GCCAACCGGATGAAGCTCGTTCTGCTGCGCGATCTCGCCGCCAACGCCGATCACGCCTTCCTGCTCGTCGATACGGGTGG
CGGCAAGCTGGTGCTCGATAATGTGACCGACCGCCTCTATGACGGCGCCCGACCGCAAGCGGTGCGCCCCGTGCTGTCGT
TCAGCGCCGACCGGCGGTGGGTCCACGCCTATCGCACCGCGGCGGAAACCCCGGCTGCAACCATCGTTCCGGGGGCGCGC
AAGAGCATCACCCTTGCGCTCGCCGATCAGCGTTCGGTCAAGGCCGTCCCGCTGACCTTCAAAACGGGTTTGAGCAAATA
G

Upstream 100 bases:

>100_bases
AGCTGGCGCCCGCGGCCCCGTGTTCGGGCAATGATGGTGAAGACGATGTTCACCATCGCCATGAAGCTTATCCTCATCCG
GCTACGGCAAATGGGACGGC

Downstream 100 bases:

>100_bases
CTGAGCACCGATTTCTTGCCCGTCAGGATTTCGACATCGCATAGCATCCCAGGAGTGATCGGCAGGCGTCGGCCGTTCGA
TACGAGAAAGCTGTTCGTCG

Product: periplasmic protein-like protein

Products: NA

Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; Sulfate Adenylyltransferase

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRRHAPSARAARSLLPLIAATLAVAPAAAQASTKLDNVKAAAPAKVVCDAVAASAVPRARDLSQLILDGAPSALDRIRMQ
QQGINRPATVNTIPDRRALEPASRMPLSFTASAPVDCRNAPSPPGVTAEWDAGSELGTRAIPVKRTRFDDRWDRVHRAAP
AALMQRQLQSANALSGLSETELLARVNQWVNREIAYVGDDRNYRRRDFWATADETLARGSGDCEDFAILKMQMLRAAGID
ANRMKLVLLRDLAANADHAFLLVDTGGGKLVLDNVTDRLYDGARPQAVRPVLSFSADRRWVHAYRTAAETPAATIVPGAR
KSITLALADQRSVKAVPLTFKTGLSK

Sequences:

>Translated_346_residues
MRRHAPSARAARSLLPLIAATLAVAPAAAQASTKLDNVKAAAPAKVVCDAVAASAVPRARDLSQLILDGAPSALDRIRMQ
QQGINRPATVNTIPDRRALEPASRMPLSFTASAPVDCRNAPSPPGVTAEWDAGSELGTRAIPVKRTRFDDRWDRVHRAAP
AALMQRQLQSANALSGLSETELLARVNQWVNREIAYVGDDRNYRRRDFWATADETLARGSGDCEDFAILKMQMLRAAGID
ANRMKLVLLRDLAANADHAFLLVDTGGGKLVLDNVTDRLYDGARPQAVRPVLSFSADRRWVHAYRTAAETPAATIVPGAR
KSITLALADQRSVKAVPLTFKTGLSK
>Mature_346_residues
MRRHAPSARAARSLLPLIAATLAVAPAAAQASTKLDNVKAAAPAKVVCDAVAASAVPRARDLSQLILDGAPSALDRIRMQ
QQGINRPATVNTIPDRRALEPASRMPLSFTASAPVDCRNAPSPPGVTAEWDAGSELGTRAIPVKRTRFDDRWDRVHRAAP
AALMQRQLQSANALSGLSETELLARVNQWVNREIAYVGDDRNYRRRDFWATADETLARGSGDCEDFAILKMQMLRAAGID
ANRMKLVLLRDLAANADHAFLLVDTGGGKLVLDNVTDRLYDGARPQAVRPVLSFSADRRWVHAYRTAAETPAATIVPGAR
KSITLALADQRSVKAVPLTFKTGLSK

Specific function: Unknown

COG id: COG3672

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37378; Mature: 37378

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHAPSARAARSLLPLIAATLAVAPAAAQASTKLDNVKAAAPAKVVCDAVAASAVPRAR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH
DLSQLILDGAPSALDRIRMQQQGINRPATVNTIPDRRALEPASRMPLSFTASAPVDCRNA
HHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCHHHCCCEEEECCCCCCCCCC
PSPPGVTAEWDAGSELGTRAIPVKRTRFDDRWDRVHRAAPAALMQRQLQSANALSGLSET
CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ELLARVNQWVNREIAYVGDDRNYRRRDFWATADETLARGSGDCEDFAILKMQMLRAAGID
HHHHHHHHHHCCEEEEECCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
ANRMKLVLLRDLAANADHAFLLVDTGGGKLVLDNVTDRLYDGARPQAVRPVLSFSADRRW
CCCEEEEEEHHHHCCCCCEEEEEECCCCEEEECCHHHHHHCCCCCHHHHHHHHHCCCHHH
VHAYRTAAETPAATIVPGARKSITLALADQRSVKAVPLTFKTGLSK
HHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCEEEEEEHHCCCCC
>Mature Secondary Structure
MRRHAPSARAARSLLPLIAATLAVAPAAAQASTKLDNVKAAAPAKVVCDAVAASAVPRAR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH
DLSQLILDGAPSALDRIRMQQQGINRPATVNTIPDRRALEPASRMPLSFTASAPVDCRNA
HHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCHHHCCCEEEECCCCCCCCCC
PSPPGVTAEWDAGSELGTRAIPVKRTRFDDRWDRVHRAAPAALMQRQLQSANALSGLSET
CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ELLARVNQWVNREIAYVGDDRNYRRRDFWATADETLARGSGDCEDFAILKMQMLRAAGID
HHHHHHHHHHCCEEEEECCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
ANRMKLVLLRDLAANADHAFLLVDTGGGKLVLDNVTDRLYDGARPQAVRPVLSFSADRRW
CCCEEEEEEHHHHCCCCCEEEEEECCCCEEEECCHHHHHHCCCCCHHHHHHHHHCCCHHH
VHAYRTAAETPAATIVPGARKSITLALADQRSVKAVPLTFKTGLSK
HHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA