| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488105
Identifier: 103488105
GI number: 103488105
Start: 2766607
End: 2767050
Strand: Direct
Name: 103488105
Synonym: Sala_2627
Alternate gene names: NA
Gene position: 2766607-2767050 (Clockwise)
Preceding gene: 103488094
Following gene: 103488107
Centisome position: 82.7
GC content: 65.32
Gene sequence:
>444_bases GTGCGGTCGGCGAGGATGATCGGCCAGGCATCGAGATCGAACGACGCAGCTTCGGCGAAGCCGGACGGCGCCGTATCGAG GATGACCGTCGTCGGCGCGAGCGACGCCTGCCAGAGCGCGGGTTCCTCAGCCGCGAACGAGCCAGGCGCACAAGGGAAAG GCGAGGCCCCAGCGCCGGGCCATCACCTCCTGCTCCTCGGCGGAGCTCCGCCTCGCGCGCATGACCTTCTGATAATCGGA CTGATAGCGGGGATTGCGCCGCAGAAACTCCTGTGCAAATCCCGGCTTGTCGAGAAGGCGCCGATCGCCATCGCTGGGCT TTTCGCCGGACATGCGCGTTCCCCCGAATGCAGGAGCGCAGGCTGTCGTTTGGCGTTTTTGCGGGCTATTCCAACAACTA GGGAGGCGGATCCCCATTTATGGGGATGTCCGCCGGCTCAGTGA
Upstream 100 bases:
>100_bases GATCACATAGGCAAGCGCACTGCCTTTGAGCGGATCGCGGACCCAGAGGCGGTGCGGGCCGTCGATGTCGCCGAGGACGA CATGACGGCCGGTCGAGAGT
Downstream 100 bases:
>100_bases GAGCCGGCGGATCATTCCGAGCGTCAATCGCGCTCGCGGCGGGCAGGCCGGTTCCAGACCAGGTCATGTTCGCCATCCTC GCCTGCGAAGAGCTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRSARMIGQASRSNDAASAKPDGAVSRMTVVGASDACQSAGSSAANEPGAQGKGEAPAPGHHLLLLGGAPPRAHDLLIIG LIAGIAPQKLLCKSRLVEKAPIAIAGLFAGHARSPECRSAGCRLAFLRAIPTTREADPHLWGCPPAQ
Sequences:
>Translated_147_residues MRSARMIGQASRSNDAASAKPDGAVSRMTVVGASDACQSAGSSAANEPGAQGKGEAPAPGHHLLLLGGAPPRAHDLLIIG LIAGIAPQKLLCKSRLVEKAPIAIAGLFAGHARSPECRSAGCRLAFLRAIPTTREADPHLWGCPPAQ >Mature_147_residues MRSARMIGQASRSNDAASAKPDGAVSRMTVVGASDACQSAGSSAANEPGAQGKGEAPAPGHHLLLLGGAPPRAHDLLIIG LIAGIAPQKLLCKSRLVEKAPIAIAGLFAGHARSPECRSAGCRLAFLRAIPTTREADPHLWGCPPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14942; Mature: 14942
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSARMIGQASRSNDAASAKPDGAVSRMTVVGASDACQSAGSSAANEPGAQGKGEAPAPG CCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCC HHLLLLGGAPPRAHDLLIIGLIAGIAPQKLLCKSRLVEKAPIAIAGLFAGHARSPECRSA CEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCHHC GCRLAFLRAIPTTREADPHLWGCPPAQ CCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSARMIGQASRSNDAASAKPDGAVSRMTVVGASDACQSAGSSAANEPGAQGKGEAPAPG CCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCC HHLLLLGGAPPRAHDLLIIGLIAGIAPQKLLCKSRLVEKAPIAIAGLFAGHARSPECRSA CEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCHHC GCRLAFLRAIPTTREADPHLWGCPPAQ CCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA