Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488094

Identifier: 103488094

GI number: 103488094

Start: 2756756

End: 2757862

Strand: Direct

Name: 103488094

Synonym: Sala_2616

Alternate gene names: NA

Gene position: 2756756-2757862 (Clockwise)

Preceding gene: 103488079

Following gene: 103488105

Centisome position: 82.41

GC content: 65.13

Gene sequence:

>1107_bases
ATGGTCTATATCCACGAACTGCCGGACTGGCCGAACCTGCGCTGGAGCGACCAGCAGCTTGCCCAGCCGCTCGCCGCCGT
GCGCCACCGACAGGGACGGTTGATCGGGCACATGGAGGCGCTTGGCTTCCCGCTGCGCGAGGAAGCCGTGCTTCAAGCAC
TCACCGAGGACGTTATCAAATCCAGCGAGATCGAGGGCGAGGTGCTGGACAGGGAGCAGGTGCGCTCCTCCATCGCCCGC
CGTCTCGGCATGGACATCGGCGGTTTGGTGGAAGCGGATCGCAACGTCGAGGGCGTTGTCGAAATGATGCTCGACGCCAC
GCAGAACTATGCGCAGCCCCTGACCGCCGAACGGCTGTTCGGCTGGCACGCGGCGCTGTTCCCCACCGGACGCAGCGGCA
TGAGCCGTATCACCGTGGGCGCATGGCGCACCGCCGAAGCTGGCCCGATGCAGGTTGTCTCGGGGCCGATTGGCCGCGAG
CGCGTCCACTACGAAGCCCCTGCATCGGAGCGGCTCGACGCGGAAATGGCGCGTTTTCTCGACTGGTTCGAGACGGCGGC
ACCCGACCCCGTCCTGAAAGCCGGAATCGCGCACCTATGGTTTGTCACCATCCACCCCTTCGATGACGGCAACGGGCGCA
TAGCGCGTGCCATCGCCGACCTTGCGCTGGCGCGCGCGGAGGGCACCGCACAGCGTTTCTACAGTATGTCCGCGCAAATC
CGGGTCGAGCGCAAAGCCTATTACGATATGCTGGAGCGGGCGCAGAAGGGCGACTTGGACATCACGCCCTGGCTGCTGTG
GTTCATCGGCTGCCTTGATCGCGCCTTCGACGGCGCTGAAACCATCCTCGCCAGCGTCATGCGCAAGGCGCGGTTTTGGG
AATCGGTCGCGGGCCAGCCCTTGAACGAACGCCAGCGCAAGGTCGTCAACCGTCTGCTGGACGGCTTCGAGGGCAAGCTT
ACCAATGCCAAATGGGCGGCGATCACCAAGGCATCGTCCGATACCGCCCTGCGCGACATCAACGATTTGCTCCGGCGCGG
CATCCTTGAGAAGGAGCCGGCCGGTGGGCGCAGCACCAGCTATTCACTGGTGCTGCCCGAGTCCTGA

Upstream 100 bases:

>100_bases
ATGCGGTGAAAGCCGCCTTATTCGCCGCATATCATGCGGTGAATATTCTTGCCCTTTGCGGTGAATAATCGCTATATTCG
CCGCAGAAAGTGCGGTGAAT

Downstream 100 bases:

>100_bases
TCCGACCGAGTCGACCTCGTTACATCTTCAGCGATCTCGTTCCTGAACCGCGGCCCAAGCTCCATGCGCCGGTTCAGCAT
GTCTACAAACCGCTCCCATC

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MVYIHELPDWPNLRWSDQQLAQPLAAVRHRQGRLIGHMEALGFPLREEAVLQALTEDVIKSSEIEGEVLDREQVRSSIAR
RLGMDIGGLVEADRNVEGVVEMMLDATQNYAQPLTAERLFGWHAALFPTGRSGMSRITVGAWRTAEAGPMQVVSGPIGRE
RVHYEAPASERLDAEMARFLDWFETAAPDPVLKAGIAHLWFVTIHPFDDGNGRIARAIADLALARAEGTAQRFYSMSAQI
RVERKAYYDMLERAQKGDLDITPWLLWFIGCLDRAFDGAETILASVMRKARFWESVAGQPLNERQRKVVNRLLDGFEGKL
TNAKWAAITKASSDTALRDINDLLRRGILEKEPAGGRSTSYSLVLPES

Sequences:

>Translated_368_residues
MVYIHELPDWPNLRWSDQQLAQPLAAVRHRQGRLIGHMEALGFPLREEAVLQALTEDVIKSSEIEGEVLDREQVRSSIAR
RLGMDIGGLVEADRNVEGVVEMMLDATQNYAQPLTAERLFGWHAALFPTGRSGMSRITVGAWRTAEAGPMQVVSGPIGRE
RVHYEAPASERLDAEMARFLDWFETAAPDPVLKAGIAHLWFVTIHPFDDGNGRIARAIADLALARAEGTAQRFYSMSAQI
RVERKAYYDMLERAQKGDLDITPWLLWFIGCLDRAFDGAETILASVMRKARFWESVAGQPLNERQRKVVNRLLDGFEGKL
TNAKWAAITKASSDTALRDINDLLRRGILEKEPAGGRSTSYSLVLPES
>Mature_368_residues
MVYIHELPDWPNLRWSDQQLAQPLAAVRHRQGRLIGHMEALGFPLREEAVLQALTEDVIKSSEIEGEVLDREQVRSSIAR
RLGMDIGGLVEADRNVEGVVEMMLDATQNYAQPLTAERLFGWHAALFPTGRSGMSRITVGAWRTAEAGPMQVVSGPIGRE
RVHYEAPASERLDAEMARFLDWFETAAPDPVLKAGIAHLWFVTIHPFDDGNGRIARAIADLALARAEGTAQRFYSMSAQI
RVERKAYYDMLERAQKGDLDITPWLLWFIGCLDRAFDGAETILASVMRKARFWESVAGQPLNERQRKVVNRLLDGFEGKL
TNAKWAAITKASSDTALRDINDLLRRGILEKEPAGGRSTSYSLVLPES

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41178; Mature: 41178

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYIHELPDWPNLRWSDQQLAQPLAAVRHRQGRLIGHMEALGFPLREEAVLQALTEDVIK
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
SSEIEGEVLDREQVRSSIARRLGMDIGGLVEADRNVEGVVEMMLDATQNYAQPLTAERLF
HCCCCCHHCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
GWHAALFPTGRSGMSRITVGAWRTAEAGPMQVVSGPIGRERVHYEAPASERLDAEMARFL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
DWFETAAPDPVLKAGIAHLWFVTIHPFDDGNGRIARAIADLALARAEGTAQRFYSMSAQI
HHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
RVERKAYYDMLERAQKGDLDITPWLLWFIGCLDRAFDGAETILASVMRKARFWESVAGQP
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
LNERQRKVVNRLLDGFEGKLTNAKWAAITKASSDTALRDINDLLRRGILEKEPAGGRSTS
CCHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
YSLVLPES
EEEEECCC
>Mature Secondary Structure
MVYIHELPDWPNLRWSDQQLAQPLAAVRHRQGRLIGHMEALGFPLREEAVLQALTEDVIK
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
SSEIEGEVLDREQVRSSIARRLGMDIGGLVEADRNVEGVVEMMLDATQNYAQPLTAERLF
HCCCCCHHCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
GWHAALFPTGRSGMSRITVGAWRTAEAGPMQVVSGPIGRERVHYEAPASERLDAEMARFL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
DWFETAAPDPVLKAGIAHLWFVTIHPFDDGNGRIARAIADLALARAEGTAQRFYSMSAQI
HHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
RVERKAYYDMLERAQKGDLDITPWLLWFIGCLDRAFDGAETILASVMRKARFWESVAGQP
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
LNERQRKVVNRLLDGFEGKLTNAKWAAITKASSDTALRDINDLLRRGILEKEPAGGRSTS
CCHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
YSLVLPES
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA