Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488064

Identifier: 103488064

GI number: 103488064

Start: 2729377

End: 2729862

Strand: Direct

Name: 103488064

Synonym: Sala_2586

Alternate gene names: NA

Gene position: 2729377-2729862 (Clockwise)

Preceding gene: 103488063

Following gene: 103488065

Centisome position: 81.59

GC content: 59.26

Gene sequence:

>486_bases
ATGAGCATGTTTCTCGAAGAGAATGACACGATCCTGCATGCCGCACCGCCGAAGGTCTGGGCCGCGCTCACCCGTTTTGA
CGCCTATGAACGGTGGAATCCCTTCGTCCGGATCTCCGGCCCGCTCGAGCAGGGCGCCCTCGTCGCCTATTCCTTCAGAA
TGAAATCGAACAAGCCGCGGTTTTTTACCATTGATGCCCGCATCACAGCGCTAGAGCCCCAAAGGTGTGTGACCTTCCGC
TTCGGATTTGGCGGACTGATGTCGTTCGAGGAGAGCTATTGCGTTGAGCCCGTCCCCGTCGGATCGCGAATGGTTCACAG
CTTTCGTTGCACCGGCCTGCTCTCCGGGCTGAAGCTGAGGCGGATGCGGCAAAACTTCAGCAAGATGCTCGAGATCACCG
ACCGGCTGTTTCAGCGGCACCTCACGCCTGCGCGGCCTCCCTTGCCCAAGAAACGTCCGAGGAAGGGATTTCGGCCTAAT
GCCTGA

Upstream 100 bases:

>100_bases
TCACCGTTCGGGCCACCATGGATACAAGCGCAGGCGCGGCTTTCTTTCGGACCTGTTCGACTGATCAGACGTGAACCGCC
GCACGACGGCGGGACGGGGA

Downstream 100 bases:

>100_bases
CGGTCCGCAAGTTTGGTCCCCGCAAGCCATCTGCGGGAGAAAGGCACCCGCAAGACGGTGCCAGCTTCCCTTGCGGCGCG
GGCCACGCCGTGGGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSMFLEENDTILHAAPPKVWAALTRFDAYERWNPFVRISGPLEQGALVAYSFRMKSNKPRFFTIDARITALEPQRCVTFR
FGFGGLMSFEESYCVEPVPVGSRMVHSFRCTGLLSGLKLRRMRQNFSKMLEITDRLFQRHLTPARPPLPKKRPRKGFRPN
A

Sequences:

>Translated_161_residues
MSMFLEENDTILHAAPPKVWAALTRFDAYERWNPFVRISGPLEQGALVAYSFRMKSNKPRFFTIDARITALEPQRCVTFR
FGFGGLMSFEESYCVEPVPVGSRMVHSFRCTGLLSGLKLRRMRQNFSKMLEITDRLFQRHLTPARPPLPKKRPRKGFRPN
A
>Mature_160_residues
SMFLEENDTILHAAPPKVWAALTRFDAYERWNPFVRISGPLEQGALVAYSFRMKSNKPRFFTIDARITALEPQRCVTFRF
GFGGLMSFEESYCVEPVPVGSRMVHSFRCTGLLSGLKLRRMRQNFSKMLEITDRLFQRHLTPARPPLPKKRPRKGFRPNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18669; Mature: 18538

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMFLEENDTILHAAPPKVWAALTRFDAYERWNPFVRISGPLEQGALVAYSFRMKSNKPR
CCCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCC
FFTIDARITALEPQRCVTFRFGFGGLMSFEESYCVEPVPVGSRMVHSFRCTGLLSGLKLR
EEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RMRQNFSKMLEITDRLFQRHLTPARPPLPKKRPRKGFRPNA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMFLEENDTILHAAPPKVWAALTRFDAYERWNPFVRISGPLEQGALVAYSFRMKSNKPR
CCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCC
FFTIDARITALEPQRCVTFRFGFGGLMSFEESYCVEPVPVGSRMVHSFRCTGLLSGLKLR
EEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RMRQNFSKMLEITDRLFQRHLTPARPPLPKKRPRKGFRPNA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA