| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488063
Identifier: 103488063
GI number: 103488063
Start: 2729044
End: 2729340
Strand: Direct
Name: 103488063
Synonym: Sala_2585
Alternate gene names: NA
Gene position: 2729044-2729340 (Clockwise)
Preceding gene: 103488062
Following gene: 103488064
Centisome position: 81.58
GC content: 62.63
Gene sequence:
>297_bases ATGAGTTCAGCCGCAGATACAGGACAAGGCATGCTCTGCCCGGTTTGCAAAGTCACGCTGTCGATCTCCGAGCGACAGGG CGTCGAGATCGATTTCTGTCCGCAATGCCGCGGCGTGTGGCTCGATCGCGGGGAGCTCGACAAGATCATCGAGCGCTCCG AAACCGCCATGCCGCCGCAGCCGCGCGACCAAAGTCGGGAGGGTTCCCAGCCATGGGGGCACCAAGACGACCGTCACCGT TCGGGCCACCATGGATACAAGCGCAGGCGCGGCTTTCTTTCGGACCTGTTCGACTGA
Upstream 100 bases:
>100_bases GTAAGCAGTGCGCTGAGGCGCGTTCCACGCACAGCTGACGGACAATGCATTTCGCCCCACTTGAAGGCTCAGATCTTCAA GCAACCGAGAGGAGGCCATC
Downstream 100 bases:
>100_bases TCAGACGTGAACCGCCGCACGACGGCGGGACGGGGAATGAGCATGTTTCTCGAAGAGAATGACACGATCCTGCATGCCGC ACCGCCGAAGGTCTGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSSAADTGQGMLCPVCKVTLSISERQGVEIDFCPQCRGVWLDRGELDKIIERSETAMPPQPRDQSREGSQPWGHQDDRHR SGHHGYKRRRGFLSDLFD
Sequences:
>Translated_98_residues MSSAADTGQGMLCPVCKVTLSISERQGVEIDFCPQCRGVWLDRGELDKIIERSETAMPPQPRDQSREGSQPWGHQDDRHR SGHHGYKRRRGFLSDLFD >Mature_97_residues SSAADTGQGMLCPVCKVTLSISERQGVEIDFCPQCRGVWLDRGELDKIIERSETAMPPQPRDQSREGSQPWGHQDDRHRS GHHGYKRRRGFLSDLFD
Specific function: Unknown
COG id: COG3809
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11142; Mature: 11010
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAADTGQGMLCPVCKVTLSISERQGVEIDFCPQCRGVWLDRGELDKIIERSETAMPPQ CCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCEECCCCHHHHHHHHHCCCCCCC PRDQSREGSQPWGHQDDRHRSGHHGYKRRRGFLSDLFD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SSAADTGQGMLCPVCKVTLSISERQGVEIDFCPQCRGVWLDRGELDKIIERSETAMPPQ CCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCEECCCCHHHHHHHHHCCCCCCC PRDQSREGSQPWGHQDDRHRSGHHGYKRRRGFLSDLFD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA