Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is zitB [C]

Identifier: 103488038

GI number: 103488038

Start: 2699576

End: 2700220

Strand: Direct

Name: zitB [C]

Synonym: Sala_2560

Alternate gene names: 103488038

Gene position: 2699576-2700220 (Clockwise)

Preceding gene: 103488037

Following gene: 103488039

Centisome position: 80.7

GC content: 66.2

Gene sequence:

>645_bases
ATGGTAGACTCGGATGAAGCAGGCGGCTGCGGCTGCACCGGAGACAGCGCGCGGGCGGAAAAGGATCCGGCCTACCGGCG
TGCGCTGTGGATCGTCGTGCTCCTCAATCTCGGTTTCGGCGCCTGCGAGATCGTCGGCGGGTTCATTGCCGACAGCCAAG
CGCTCAAGGCCGACGCGCTCGACTTCATGGGCGACGGGACGATCACGTTAGTCGGCCTGATTGCGCTCGGCTGGACTGCG
GCGGCGCGCGCACGGATTGCGCTCGTTCAGGGAATATTCCTCCTCACGTTGGGTCTCGGCGTGATCGCTGTGGCGCTCTG
GCGCGCCTTGACTGCTGTCGCGCCCGAAGCCGACTTGATGGGCGGCATCGGCGTCGCTGCGCTTGTCGTCAATGTCGCAT
CGGCCTTCGTCTTGTCGCGCTTCCGTGAAGGGGACGCAAATGTGCGCGCGGTCTGGCTGTTCAGCCGCAACGATGCGCTC
GCCAATGTTGCCGTGATCGTCGCGGCAGCGCTCGTCGCCTGGACAGGGAGCGCCTGGCCCGATCTGACGGTTGCCGCCGT
GATCGCGGCCCTCTTCCTCCACTCCGCCTATGAAATCCTCCGCGGCGCGCGTACCGAGCTGCGCGAGTTGACGCAGACGG
CTTGA

Upstream 100 bases:

>100_bases
CGATCAGCCTGTTCCACTTCAAGGCACCCAAAAGCATATAACGCGAACCATTTGCAGAAATGCTTGCTTCTACAGTTACT
GGAGGTTGTAGAAGCGGCGA

Downstream 100 bases:

>100_bases
TCTTTGGAGTTCACTGCGTGGTCCTGCTTTTCCGTCTTCGCCTGTTCACTCTTCTTCTTGTAGCGCTGGGCGGCATCATG
CTCTCTCCGGTAGCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Integral Membrane Protein; Co/Zn/Cd Efflux System Membrane Component; Cation Efflux Permease; Cation Efflux System Permease; Cation Diffusion Facilitator Family Transporter; Cation Diffusion Facilitator; Heavy Metal Detoxification Protein; Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND OM Export Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Zinc Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVDSDEAGGCGCTGDSARAEKDPAYRRALWIVVLLNLGFGACEIVGGFIADSQALKADALDFMGDGTITLVGLIALGWTA
AARARIALVQGIFLLTLGLGVIAVALWRALTAVAPEADLMGGIGVAALVVNVASAFVLSRFREGDANVRAVWLFSRNDAL
ANVAVIVAAALVAWTGSAWPDLTVAAVIAALFLHSAYEILRGARTELRELTQTA

Sequences:

>Translated_214_residues
MVDSDEAGGCGCTGDSARAEKDPAYRRALWIVVLLNLGFGACEIVGGFIADSQALKADALDFMGDGTITLVGLIALGWTA
AARARIALVQGIFLLTLGLGVIAVALWRALTAVAPEADLMGGIGVAALVVNVASAFVLSRFREGDANVRAVWLFSRNDAL
ANVAVIVAAALVAWTGSAWPDLTVAAVIAALFLHSAYEILRGARTELRELTQTA
>Mature_214_residues
MVDSDEAGGCGCTGDSARAEKDPAYRRALWIVVLLNLGFGACEIVGGFIADSQALKADALDFMGDGTITLVGLIALGWTA
AARARIALVQGIFLLTLGLGVIAVALWRALTAVAPEADLMGGIGVAALVVNVASAFVLSRFREGDANVRAVWLFSRNDAL
ANVAVIVAAALVAWTGSAWPDLTVAAVIAALFLHSAYEILRGARTELRELTQTA

Specific function: Involved In Zinc Efflux Across The Cytoplasmic Membrane, Thus Reducing Zinc Accumulation In The Cytoplasm And Rendering Bacteria More Resistant To Zinc. It May Contribute To Zinc Homeostasis At Low Concentrations Of Zinc, Whereas Znta Is Required For Grow

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22197; Mature: 22197

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSDEAGGCGCTGDSARAEKDPAYRRALWIVVLLNLGFGACEIVGGFIADSQALKADAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH
DFMGDGTITLVGLIALGWTAAARARIALVQGIFLLTLGLGVIAVALWRALTAVAPEADLM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GGIGVAALVVNVASAFVLSRFREGDANVRAVWLFSRNDALANVAVIVAAALVAWTGSAWP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
DLTVAAVIAALFLHSAYEILRGARTELRELTQTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDSDEAGGCGCTGDSARAEKDPAYRRALWIVVLLNLGFGACEIVGGFIADSQALKADAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH
DFMGDGTITLVGLIALGWTAAARARIALVQGIFLLTLGLGVIAVALWRALTAVAPEADLM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GGIGVAALVVNVASAFVLSRFREGDANVRAVWLFSRNDALANVAVIVAAALVAWTGSAWP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
DLTVAAVIAALFLHSAYEILRGARTELRELTQTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA