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The map label for this gene is ahyR [H]

Identifier: 103488004

GI number: 103488004

Start: 2661658

End: 2662488

Strand: Direct

Name: ahyR [H]

Synonym: Sala_2525

Alternate gene names: 103488004

Gene position: 2661658-2662488 (Clockwise)

Preceding gene: 103488003

Following gene: 103488005

Centisome position: 79.57

GC content: 63.3

Gene sequence:

>831_bases
ATGGAAAAGGTTCGCGGCGATAGTTGGAGCGGACCGCAGGCGAGCGGGTCGGGAACGCGCCGGCGGCCGATGAACGATGT
GAAGCATTATTATCTGACAGAGGAACTCGCACAGGAATTTACAGGAGCAGACAGAGAAGAGCAGCTCTTTGCCGCACTGA
CCAAGGCTGCGGGCCGAATGGGGTTCGACCATTTCGCGCTTGCTTTCGATCGGCGCGGAACCGGCGAACCGGCGTCGATT
CTCGTGCACAATTATCCCGACGCCTGGGCCAAGGTCTATGTCGGCTTCGATCTCAGCGGAACCGATCCGATCCGCCGCGC
TAGCGAGCGATCGCTGACCGGCTTCGAATGGCGCCACGTCGATCGCTATATTCCGCTGAGCCGCGGCGACCGCCAATTGC
TGTCGGTGGCGCGCGATAGCGGCGTCGGTGACGGCTTCACGGTTCCTCGCCATCTGCCCGGCGAGGCATCGGGAACCTGT
TCCTTCGCAGTCCGTCCGCACGCGGACATTCCGGCGGACATGCTCCACGCCGCCGAAATCCTCGGCGCGATCGCCATCGC
TTCGGCGCGTGAGTTGATCGGCTCCTCTCCTTTACGGCCACGCCCGATACTTACCGAACGGCAACGCGAATGCGTGCTCT
GGTCGGCGCGCGGCAAGACCGCCGGCGAGATCGCCGATATTCTCGGGATCAGCGAAGAGACGGTCGTGCGCCACCTCAAG
ATGGCGCGCGAGCGCTATTCGGTGCATTGCCGCTCGATGCTGATCCTGTGCGCGCTGTTCGACGGGCTGATCGGCTTCTC
GGACATCTACGACTGGTGGCGCCCGAACTGA

Upstream 100 bases:

>100_bases
ATCTCGCTGACCGATCGATCGCCATGCGCCGGGCTGCGGGAACAGCGGTCGGACAGGGCGTGAGGACCCGTCGGAAATTC
CCCCGTTCGCCCGCGCCGAA

Downstream 100 bases:

>100_bases
CGCGCCACGCATAATCGCAAAATCCTTGCCCAGAAATGGGCATGGCGGCCGCAAAGGATCGATGGTCTGATTCCGGCTCC
ACAGCCAAGGAATCATCATG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRMGFDHFALAFDRRGTGEPASI
LVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTC
SFAVRPHADIPADMLHAAEILGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN

Sequences:

>Translated_276_residues
MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRMGFDHFALAFDRRGTGEPASI
LVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTC
SFAVRPHADIPADMLHAAEILGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN
>Mature_276_residues
MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRMGFDHFALAFDRRGTGEPASI
LVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHVDRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTC
SFAVRPHADIPADMLHAAEILGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=234, Percent_Identity=26.0683760683761, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 30698; Mature: 30698

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRM
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GFDHFALAFDRRGTGEPASILVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHV
CCHHHHEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHH
DRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTCSFAVRPHADIPADMLHAAEI
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
HHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHH
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKVRGDSWSGPQASGSGTRRRPMNDVKHYYLTEELAQEFTGADREEQLFAALTKAAGRM
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GFDHFALAFDRRGTGEPASILVHNYPDAWAKVYVGFDLSGTDPIRRASERSLTGFEWRHV
CCHHHHEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHH
DRYIPLSRGDRQLLSVARDSGVGDGFTVPRHLPGEASGTCSFAVRPHADIPADMLHAAEI
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LGAIAIASARELIGSSPLRPRPILTERQRECVLWSARGKTAGEIADILGISEETVVRHLK
HHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHH
MARERYSVHCRSMLILCALFDGLIGFSDIYDWWRPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]