Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is zitB [C]

Identifier: 103487923

GI number: 103487923

Start: 2582648

End: 2583385

Strand: Direct

Name: zitB [C]

Synonym: Sala_2444

Alternate gene names: 103487923

Gene position: 2582648-2583385 (Clockwise)

Preceding gene: 103487921

Following gene: 103487924

Centisome position: 77.21

GC content: 65.31

Gene sequence:

>738_bases
ATGTATAGGCGGTCCTCGTCCGAAGTTGAAGGCGGCAAAGCGAAGAGCGCGCCACCACCATGGAGTGAAGACGCGATGGC
GGAGGGATCCGAGAACGGCGACGGCTGCGGCTGCACGGGAGACCCGGTGCGCGCGGAAAAGGACCCGGCCTATCGCCGTG
CTCTTTGGATCGTGGTTATCCTAAATCTCGGCTTCGGCGCTATCGAGATCGTCGGCGGATTCATCGCCAACAGCCAGGCG
CTGAAGGCCGACTCGCTCGACTTCATCGGCGACGGCACCATCACGCTGGCCGGCCTCGTCGCGATCGGCTGGACGGCGCT
CGCCCGCACCCGCATCGCTCTTGCCCAAGGCCTGTTCCTGCTGACGCTCGGGCTCGGCGTCATCGGCGTCGCGCTGTGGC
GCGCCCTGACAGCGGTTCCGCCCGAAGCCGAGCTCATGGGCGGCATCGGCTTCGTTGCACTGCTCGTCAATCTCACCTCG
GCGGCGGTCCTCTCGCGGTTTCGCGAAGGCGACGCCAATGTCCGCGCTGTTTGGCTGTTCAGCCGCAATGACGCGGTCGC
CAATGTCGCGGTAATCATCGCTGCGGGTCTCGTCGCATGGACCGGCCAGGCCTGGCCCGACCTTGCAGTGGCCGCCATCA
TTGCAGCGCTCTTCCTGCATTCGGCCTATGAAATTCTTCGCAGCGCGCGGACCGAGCTGCGCCAACTGTCGGAACAAGGG
ATTCGTGGTCAGGCTTGA

Upstream 100 bases:

>100_bases
TAGAAGCGGATGGTGTTGACCTTGGTCCCGGTCTCCCGGGCAAGGTCGCCGATCGCGAGCCGCTTGGTCATATTATGCTT
GATCCTCCAGTGACTGGAGG

Downstream 100 bases:

>100_bases
CCCTGTAGTTGCTACAGGGTGCATAAGGCCGGCGAATCGACGCAAAGGGAAATGTCGCGAGCATGCTGGATCGACGTCAA
GCTGCCGGCCTGATCGCCGC

Product: cation efflux protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Cation Efflux Permease; Heavy Metal Detoxification Protein; Cation Diffusion Facilitator; Transmembrane Protein; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND OM Export Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Cation Efflux System Permease; Cation Diffusion Facilitator Family Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MYRRSSSEVEGGKAKSAPPPWSEDAMAEGSENGDGCGCTGDPVRAEKDPAYRRALWIVVILNLGFGAIEIVGGFIANSQA
LKADSLDFIGDGTITLAGLVAIGWTALARTRIALAQGLFLLTLGLGVIGVALWRALTAVPPEAELMGGIGFVALLVNLTS
AAVLSRFREGDANVRAVWLFSRNDAVANVAVIIAAGLVAWTGQAWPDLAVAAIIAALFLHSAYEILRSARTELRQLSEQG
IRGQA

Sequences:

>Translated_245_residues
MYRRSSSEVEGGKAKSAPPPWSEDAMAEGSENGDGCGCTGDPVRAEKDPAYRRALWIVVILNLGFGAIEIVGGFIANSQA
LKADSLDFIGDGTITLAGLVAIGWTALARTRIALAQGLFLLTLGLGVIGVALWRALTAVPPEAELMGGIGFVALLVNLTS
AAVLSRFREGDANVRAVWLFSRNDAVANVAVIIAAGLVAWTGQAWPDLAVAAIIAALFLHSAYEILRSARTELRQLSEQG
IRGQA
>Mature_245_residues
MYRRSSSEVEGGKAKSAPPPWSEDAMAEGSENGDGCGCTGDPVRAEKDPAYRRALWIVVILNLGFGAIEIVGGFIANSQA
LKADSLDFIGDGTITLAGLVAIGWTALARTRIALAQGLFLLTLGLGVIGVALWRALTAVPPEAELMGGIGFVALLVNLTS
AAVLSRFREGDANVRAVWLFSRNDAVANVAVIIAAGLVAWTGQAWPDLAVAAIIAALFLHSAYEILRSARTELRQLSEQG
IRGQA

Specific function: Involved In Zinc Efflux Across The Cytoplasmic Membrane, Thus Reducing Zinc Accumulation In The Cytoplasm And Rendering Bacteria More Resistant To Zinc. It May Contribute To Zinc Homeostasis At Low Concentrations Of Zinc, Whereas Znta Is Required For Grow

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25685; Mature: 25685

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRSSSEVEGGKAKSAPPPWSEDAMAEGSENGDGCGCTGDPVRAEKDPAYRRALWIVVI
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LNLGFGAIEIVGGFIANSQALKADSLDFIGDGTITLAGLVAIGWTALARTRIALAQGLFL
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLGVIGVALWRALTAVPPEAELMGGIGFVALLVNLTSAAVLSRFREGDANVRAVWLF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SRNDAVANVAVIIAAGLVAWTGQAWPDLAVAAIIAALFLHSAYEILRSARTELRQLSEQG
ECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IRGQA
CCCCC
>Mature Secondary Structure
MYRRSSSEVEGGKAKSAPPPWSEDAMAEGSENGDGCGCTGDPVRAEKDPAYRRALWIVVI
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LNLGFGAIEIVGGFIANSQALKADSLDFIGDGTITLAGLVAIGWTALARTRIALAQGLFL
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLGVIGVALWRALTAVPPEAELMGGIGFVALLVNLTSAAVLSRFREGDANVRAVWLF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SRNDAVANVAVIIAAGLVAWTGQAWPDLAVAAIIAALFLHSAYEILRSARTELRQLSEQG
ECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IRGQA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA