Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487918

Identifier: 103487918

GI number: 103487918

Start: 2576165

End: 2577391

Strand: Direct

Name: 103487918

Synonym: Sala_2439

Alternate gene names: NA

Gene position: 2576165-2577391 (Clockwise)

Preceding gene: 103487917

Following gene: 103487919

Centisome position: 77.01

GC content: 68.54

Gene sequence:

>1227_bases
ATGCGCCCATATTTTACGGCAGCCTTGCTTGCGCTGCCCTCGGCTCTTCACGCCGAGCCGATGACGCTCGATTCGGCGCT
CAGCCGAGCAGCATCGGAGGCACCCGAACTGCAAAGCCGCGAAGCGGGCGTCGACGCCGCCCAATCGGCGGCGATCGCCG
CCGACCGGCTGCCCGACCCGAAACTCAATATCGTCCTCCAGGATTTCCCGGTGACCGGACCCGACGCGGGCCGGTTCAAT
CGCGACGATTTCACGATGCAGGTCATCGGCGTCAGCCAGGATTTTCCGAACCCCGCCAAACGCCGCGCGCGCGCGACCCG
CGCGCAGGCCGACATTGGAATCGCCCGCGCCGACGAAGCGGTCACCGCGCAGGACATCAGGCTCGCGACCGCGCTCGCCT
GGGTCGATCTCTATTATGCCAAGAAGGAGCTGAAGGAACTCGACCTGCTCGATAGCGGCCTCGAGGACCTTCAATCGACC
GTGACGGCGCGGCTTGCCAGCGGTGCGGCGCGCCCGGCGCAGGCGCTCGAACCCGATCAGCTTCGCGCCGCGATCAACGA
TCGCCGCAGCGCGCTCGCCGCCGAGATCGCCCGCGCCCGCGCGCAGCTCGCCCGCTTCACCGGCGACCCCGCCGCCGACA
CGCTCGGCGACTTGCCGCCGCAGTCGATCGACGAACAAGGATTGCGCGCCGGCATCGACGCCCTGCCAAAGCTCAGAGCA
CTCGATGCCCGCGCCCTCGCCGCCGACGCCGAGACCGGTCTCGCACGCGCCGACAAGCGACCCGACTGGAGCGTCAACGC
GGCCTATGGGCGCCGCGAGCCCAATTACGGTGATCTCGTCACGGTCGGGGTCACCGTCGACCTGCCCTTCTTCTCGAAAA
AGCGGCAGGACCCCAAGATCGCCGCGCGCGCCAGCGAGGCGATGCGCGCCCGGCTCGACCGCGAGGCTGCCAAGCGAGAC
ATTGCGGCGGCGCTCGACGCCGATCTCGCCGATCACCGCATGCATCATGAGCAGCTCGCCAATGCACGTACGCGGCTCGT
GCCGCTCGCGAAGAAGCGCGCCGAGCTCGATCTTGCAAGCTACGCCGCCGGAAAGCTCGACCTCGGGACCGCGCTCCTGT
CGACTCTCGCGCTTGCCGAGGCCGAAGTCGATGCGCTGGCGCGCGAAGCCGAGGTCGCGCGCGACGCGATCCGGATCAAT
TATATTTATGGGGAGGCAGGTCGATGA

Upstream 100 bases:

>100_bases
GTCCGGCGACCAAAGGATGCCCCCGCAAGGGTAACGGTCTTTCTTCCCCGGCGTACAGACGCCGGGGAGGCTTTCGCCCA
GTCCACAGCAGGGGGACATC

Downstream 100 bases:

>100_bases
CCGATGCAACATCAGCGGCGCGCTGGCGCGTCGCAATCCTGGCCACGGTGCTGATCGCGGGCGGCGGCGGTTATTGGTTG
GGACAGAGCGGCAAGAGCGA

Product: CzcC family heavy metal RND efflux outer membrane protein

Products: NA

Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cation Resistance Protein CzcC; Outer Membrane Cation Efflux Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MRPYFTAALLALPSALHAEPMTLDSALSRAASEAPELQSREAGVDAAQSAAIAADRLPDPKLNIVLQDFPVTGPDAGRFN
RDDFTMQVIGVSQDFPNPAKRRARATRAQADIGIARADEAVTAQDIRLATALAWVDLYYAKKELKELDLLDSGLEDLQST
VTARLASGAARPAQALEPDQLRAAINDRRSALAAEIARARAQLARFTGDPAADTLGDLPPQSIDEQGLRAGIDALPKLRA
LDARALAADAETGLARADKRPDWSVNAAYGRREPNYGDLVTVGVTVDLPFFSKKRQDPKIAARASEAMRARLDREAAKRD
IAAALDADLADHRMHHEQLANARTRLVPLAKKRAELDLASYAAGKLDLGTALLSTLALAEAEVDALAREAEVARDAIRIN
YIYGEAGR

Sequences:

>Translated_408_residues
MRPYFTAALLALPSALHAEPMTLDSALSRAASEAPELQSREAGVDAAQSAAIAADRLPDPKLNIVLQDFPVTGPDAGRFN
RDDFTMQVIGVSQDFPNPAKRRARATRAQADIGIARADEAVTAQDIRLATALAWVDLYYAKKELKELDLLDSGLEDLQST
VTARLASGAARPAQALEPDQLRAAINDRRSALAAEIARARAQLARFTGDPAADTLGDLPPQSIDEQGLRAGIDALPKLRA
LDARALAADAETGLARADKRPDWSVNAAYGRREPNYGDLVTVGVTVDLPFFSKKRQDPKIAARASEAMRARLDREAAKRD
IAAALDADLADHRMHHEQLANARTRLVPLAKKRAELDLASYAAGKLDLGTALLSTLALAEAEVDALAREAEVARDAIRIN
YIYGEAGR
>Mature_408_residues
MRPYFTAALLALPSALHAEPMTLDSALSRAASEAPELQSREAGVDAAQSAAIAADRLPDPKLNIVLQDFPVTGPDAGRFN
RDDFTMQVIGVSQDFPNPAKRRARATRAQADIGIARADEAVTAQDIRLATALAWVDLYYAKKELKELDLLDSGLEDLQST
VTARLASGAARPAQALEPDQLRAAINDRRSALAAEIARARAQLARFTGDPAADTLGDLPPQSIDEQGLRAGIDALPKLRA
LDARALAADAETGLARADKRPDWSVNAAYGRREPNYGDLVTVGVTVDLPFFSKKRQDPKIAARASEAMRARLDREAAKRD
IAAALDADLADHRMHHEQLANARTRLVPLAKKRAELDLASYAAGKLDLGTALLSTLALAEAEVDALAREAEVARDAIRIN
YIYGEAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43846; Mature: 43846

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYFTAALLALPSALHAEPMTLDSALSRAASEAPELQSREAGVDAAQSAAIAADRLPDP
CCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCC
KLNIVLQDFPVTGPDAGRFNRDDFTMQVIGVSQDFPNPAKRRARATRAQADIGIARADEA
CEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCH
VTAQDIRLATALAWVDLYYAKKELKELDLLDSGLEDLQSTVTARLASGAARPAQALEPDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHH
LRAAINDRRSALAAEIARARAQLARFTGDPAADTLGDLPPQSIDEQGLRAGIDALPKLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LDARALAADAETGLARADKRPDWSVNAAYGRREPNYGDLVTVGVTVDLPFFSKKRQDPKI
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCHHCCCCCCHH
AARASEAMRARLDREAAKRDIAAALDADLADHRMHHEQLANARTRLVPLAKKRAELDLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAGKLDLGTALLSTLALAEAEVDALAREAEVARDAIRINYIYGEAGR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
>Mature Secondary Structure
MRPYFTAALLALPSALHAEPMTLDSALSRAASEAPELQSREAGVDAAQSAAIAADRLPDP
CCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCC
KLNIVLQDFPVTGPDAGRFNRDDFTMQVIGVSQDFPNPAKRRARATRAQADIGIARADEA
CEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCH
VTAQDIRLATALAWVDLYYAKKELKELDLLDSGLEDLQSTVTARLASGAARPAQALEPDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHH
LRAAINDRRSALAAEIARARAQLARFTGDPAADTLGDLPPQSIDEQGLRAGIDALPKLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LDARALAADAETGLARADKRPDWSVNAAYGRREPNYGDLVTVGVTVDLPFFSKKRQDPKI
HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCHHCCCCCCHH
AARASEAMRARLDREAAKRDIAAALDADLADHRMHHEQLANARTRLVPLAKKRAELDLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAAGKLDLGTALLSTLALAEAEVDALAREAEVARDAIRINYIYGEAGR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA