Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is cusB [H]

Identifier: 103487919

GI number: 103487919

Start: 2577388

End: 2578614

Strand: Direct

Name: cusB [H]

Synonym: Sala_2440

Alternate gene names: 103487919

Gene position: 2577388-2578614 (Clockwise)

Preceding gene: 103487918

Following gene: 103487920

Centisome position: 77.05

GC content: 67.24

Gene sequence:

>1227_bases
ATGACCGATGCAACATCAGCGGCGCGCTGGCGCGTCGCAATCCTGGCCACGGTGCTGATCGCGGGCGGCGGCGGTTATTG
GTTGGGACAGAGCGGCAAGAGCGATGCACCAACCGAGACGGCAAGCGGCGGGCGCAAGATCCTCTACTATTATGATCCGA
TGTTCCCGAACCAGAAGTTCGACAAGCCCGGCAAGTCGCCCTTCATGGACATGCAGCTCGAGCCCAAATATGCCGACGAG
GGTGGCGGCGCGGCGCCCGGCGTGTCGATTGACCCGTCGGCGCGTCAGAGCCTCGGCATAAGAGTGGTCGCGGCCGAAAT
GGGGAGCCTTGCCGCAACCTTCGACGTCAACGGCAGTATCGATTTCAACCAGCGCGATGTCGCGATCGTCCAGGCGCGCT
CGGGCGGCTTCGTCGAACGCGTCTATCGCCTCGCGCCTGGCGATGTCATCGGCGCCGGTGCGCCGATCGCCGAATTGCAA
TTGCCTGAATGGGGCAGCGCCCAGACCGAATATCTGAGCGTCAAGAAGCTCGGCAAACCTGAACTCACGGCGGCCGCGCG
GCAGCGGCTGCGGCTGATGGGCATGCCCGAAGGCGTGATCGCCGAGGTCGACCGGAGCGGACGGACCGGCGGCAGACTGA
CGGTGCGCGCGCCGATCGGCGGCGTGGTCCAGACGCTCAATGCCCGTGCAGGCGTGACTCTCGCCTCGGGGCAGACACTT
GCCGAAATCTCGGGACTTGGAACGGTGTGGCTCAATGCCGCGCTCCCCGAAGCGCAGGCCGGACTGGTGAAGATCGGCCA
ACCTGCCACCGCGAACCTCACCGCCTTTCCCGGCGAGGCTTTTACCGGGCGGGTCGTCGCGATCCTGCCGACCGCAGCGG
CGGACAGCCGGACGCTGACAGTGCGCATCGAGCTCGCCAACCGCGGCGGTCGCCTACGCCCCGGCATGTTCGCCGTCGTC
GCGCTCGGCGGGGACGCCAAGCCAACGCTGCTGGTGCCAAGCGAAGCGGTGATCCGCACCGGCACGCGCAGCATCGTGAT
GCTCGAGAAGGGCGACGGACGCTACCATCCCGCCGAAGTGGTCGCCGGACGCGAAGGCGGCGGCAAGACCGAGATATTGC
GAGGGCTCGCCCCCGGCGAGAAGGTCGTCGCGTCGGGCCAGTTCCTGCTCGATTCCGAGGCGAGCCTGACCGGTCTCACG
GTTCGTCCGCTGGAGCCAGCGCAATGA

Upstream 100 bases:

>100_bases
CTCTCGCGCTTGCCGAGGCCGAAGTCGATGCGCTGGCGCGCGAAGCCGAGGTCGCGCGCGACGCGATCCGGATCAATTAT
ATTTATGGGGAGGCAGGTCG

Downstream 100 bases:

>100_bases
TCGCACGCATTATTCGCGCCTCGGTCGCGGCGCGCGGGCTTGTCGTCGCTTCGGCGCTGATCCTGACCTTGCTCGGGATC
GCCGCGGTGCGCACGACTCC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTDATSAARWRVAILATVLIAGGGGYWLGQSGKSDAPTETASGGRKILYYYDPMFPNQKFDKPGKSPFMDMQLEPKYADE
GGGAAPGVSIDPSARQSLGIRVVAAEMGSLAATFDVNGSIDFNQRDVAIVQARSGGFVERVYRLAPGDVIGAGAPIAELQ
LPEWGSAQTEYLSVKKLGKPELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTLNARAGVTLASGQTL
AEISGLGTVWLNAALPEAQAGLVKIGQPATANLTAFPGEAFTGRVVAILPTAAADSRTLTVRIELANRGGRLRPGMFAVV
ALGGDAKPTLLVPSEAVIRTGTRSIVMLEKGDGRYHPAEVVAGREGGGKTEILRGLAPGEKVVASGQFLLDSEASLTGLT
VRPLEPAQ

Sequences:

>Translated_408_residues
MTDATSAARWRVAILATVLIAGGGGYWLGQSGKSDAPTETASGGRKILYYYDPMFPNQKFDKPGKSPFMDMQLEPKYADE
GGGAAPGVSIDPSARQSLGIRVVAAEMGSLAATFDVNGSIDFNQRDVAIVQARSGGFVERVYRLAPGDVIGAGAPIAELQ
LPEWGSAQTEYLSVKKLGKPELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTLNARAGVTLASGQTL
AEISGLGTVWLNAALPEAQAGLVKIGQPATANLTAFPGEAFTGRVVAILPTAAADSRTLTVRIELANRGGRLRPGMFAVV
ALGGDAKPTLLVPSEAVIRTGTRSIVMLEKGDGRYHPAEVVAGREGGGKTEILRGLAPGEKVVASGQFLLDSEASLTGLT
VRPLEPAQ
>Mature_407_residues
TDATSAARWRVAILATVLIAGGGGYWLGQSGKSDAPTETASGGRKILYYYDPMFPNQKFDKPGKSPFMDMQLEPKYADEG
GGAAPGVSIDPSARQSLGIRVVAAEMGSLAATFDVNGSIDFNQRDVAIVQARSGGFVERVYRLAPGDVIGAGAPIAELQL
PEWGSAQTEYLSVKKLGKPELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTLNARAGVTLASGQTLA
EISGLGTVWLNAALPEAQAGLVKIGQPATANLTAFPGEAFTGRVVAILPTAAADSRTLTVRIELANRGGRLRPGMFAVVA
LGGDAKPTLLVPSEAVIRTGTRSIVMLEKGDGRYHPAEVVAGREGGGKTEILRGLAPGEKVVASGQFLLDSEASLTGLTV
RPLEPAQ

Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=395, Percent_Identity=41.5189873417722, Blast_Score=302, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42398; Mature: 42267

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATSAARWRVAILATVLIAGGGGYWLGQSGKSDAPTETASGGRKILYYYDPMFPNQKF
CCCCCCHHHHHHHEEEEHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
DKPGKSPFMDMQLEPKYADEGGGAAPGVSIDPSARQSLGIRVVAAEMGSLAATFDVNGSI
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEECCCEE
DFNQRDVAIVQARSGGFVERVYRLAPGDVIGAGAPIAELQLPEWGSAQTEYLSVKKLGKP
CCCCCCEEEEEECCCCHHHHHHHHCCCCEEECCCCHHEEECCCCCCCCHHEEEHHHCCCC
ELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTLNARAGVTLASGQTL
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHCCCCCEEEECCCCE
AEISGLGTVWLNAALPEAQAGLVKIGQPATANLTAFPGEAFTGRVVAILPTAAADSRTLT
EHHHCCCEEEEECCCCCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCEEEE
VRIELANRGGRLRPGMFAVVALGGDAKPTLLVPSEAVIRTGTRSIVMLEKGDGRYHPAEV
EEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCHHHEECCCCEEEEEECCCCCCCCHHE
VAGREGGGKTEILRGLAPGEKVVASGQFLLDSEASLTGLTVRPLEPAQ
EECCCCCCHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure 
TDATSAARWRVAILATVLIAGGGGYWLGQSGKSDAPTETASGGRKILYYYDPMFPNQKF
CCCCCHHHHHHHEEEEHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
DKPGKSPFMDMQLEPKYADEGGGAAPGVSIDPSARQSLGIRVVAAEMGSLAATFDVNGSI
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEECCCEE
DFNQRDVAIVQARSGGFVERVYRLAPGDVIGAGAPIAELQLPEWGSAQTEYLSVKKLGKP
CCCCCCEEEEEECCCCHHHHHHHHCCCCEEECCCCHHEEECCCCCCCCHHEEEHHHCCCC
ELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTLNARAGVTLASGQTL
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHCCCCCEEEECCCCE
AEISGLGTVWLNAALPEAQAGLVKIGQPATANLTAFPGEAFTGRVVAILPTAAADSRTLT
EHHHCCCEEEEECCCCCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCEEEE
VRIELANRGGRLRPGMFAVVALGGDAKPTLLVPSEAVIRTGTRSIVMLEKGDGRYHPAEV
EEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCHHHEECCCCEEEEEECCCCCCCCHHE
VAGREGGGKTEILRGLAPGEKVVASGQFLLDSEASLTGLTVRPLEPAQ
EECCCCCCHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]