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The map label for this gene is copB [H]

Identifier: 103487901

GI number: 103487901

Start: 2558106

End: 2559317

Strand: Reverse

Name: copB [H]

Synonym: Sala_2421

Alternate gene names: 103487901

Gene position: 2559317-2558106 (Counterclockwise)

Preceding gene: 103487902

Following gene: 103487900

Centisome position: 76.51

GC content: 64.85

Gene sequence:

>1212_bases
ATGACCCGGGTCGCGCTTCTCCTCGCGGGTATCGCCCCGCTGGCCTTTGCTGTGCCCGCCGCGGCGCAGTCGATGGATCA
TTCGATGCATGGTGCGGCGCCCGCGCCGACACCCGCTCCCTCGCCAACGCCAGCACCCGTAGCGCAGTCCGCGCCCGAAG
CGCCCGCCGAAGGGTCGATGGAGCAGATGGACCATGGGAACATGCAGGGCATGGACATGGAACCCGAGGCTTCAAGCTGC
CCGCCCGAACATGCGGCGATGGGTCATTGTACGCCTGAGGCGGAAGCTCCAGGCAAGGGCGCTTCGGACATGGGTGCGAT
GGATCATGGCGCACCGCAGCCGTCCGATCCCGATTGCCCGCCCGAACATGCCAAAATGGGCCATTGCACCCCGAAGGGCG
GATCTGCGGACGCGATGGCGGGAATGGAAGGCATGGCGACCACGAGCAGCGCTAGCGGCACCGATTTGCCGCCGGGCGAT
GCTACCGCGCCTGCGCCTCCCGGCGACTGGTATGCCGATCGCATTTATCCCCAAGCCGAAATGGAGCATTCGCGCCACGA
CATGATGAAAGAGAATGGTGCGCAGACCATCGCTTTCATCAGCTTCAACCTTGCCGAATATCAGGCGCGCAAGGGCCGCG
ACGGGTTCCGCTGGGACGGTGAGGCTTGGTACGGCGGCGACATTAACCGGCTGACGATCAAGAGCGAAGGCGAGGGCGTG
TTCGGCGAAGGCATCGAGAGCGCCGAGGTACAGGCGCTCTACAGCCGGGCGATCGGACCCTATTTCAACGCGCAGGCGGG
TATCAGGCAGGATCTTGGGCCCGGCCCCGACCGCACCTATGCGACGATCGGCTTCGAGGGGCTCGCCCCCTATTGGTTCG
AAGTCGAGGGCGCGCTGTTTCTTTCGAACAAGGGTGATCTGCTCGCCCGGCTCGAAGGCTATTACGACCAGCGCATCACC
CAGAAACTGATCCTCCAGCCGATGGCGGAGGTCAATTTTGCGCTCCAGGATGTCCCCGAGACCGGCGTTGGTTCGGGGCT
TTCGGATTTCGAGCTCGGGCTTCGCCTGCGTTACGAGGTCGTGAAGGAATTCGCGCCTTATGTCGGCGTCGAATGGGCGC
GCAAGGTCGGCGATACCGCGCGTTTTGCCCGCGCCGCGGGCGAGGATGCGAGCGGCGTCAGCTTCGTGATGGGGGTGCGG
GCCTGGTTCTAG

Upstream 100 bases:

>100_bases
CCGACGCGCTCGGCGACTGGGCGTTCCATTGCCACCTTCTCTATCACATGCACGCGGGGATGATGCGCGTCGTCAGCGTC
CGTCCGAAGGGAGACGGCGA

Downstream 100 bases:

>100_bases
AAGTTTCGCGGGGTGGCGACACGTCGAGGAGAAATGCCGTGAAACCAGCCTATCGCAGCCTCGCGCTGCAGACGATCGTC
AGCGGCGTCATCATGTATCT

Product: copper resistance B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTRVALLLAGIAPLAFAVPAAAQSMDHSMHGAAPAPTPAPSPTPAPVAQSAPEAPAEGSMEQMDHGNMQGMDMEPEASSC
PPEHAAMGHCTPEAEAPGKGASDMGAMDHGAPQPSDPDCPPEHAKMGHCTPKGGSADAMAGMEGMATTSSASGTDLPPGD
ATAPAPPGDWYADRIYPQAEMEHSRHDMMKENGAQTIAFISFNLAEYQARKGRDGFRWDGEAWYGGDINRLTIKSEGEGV
FGEGIESAEVQALYSRAIGPYFNAQAGIRQDLGPGPDRTYATIGFEGLAPYWFEVEGALFLSNKGDLLARLEGYYDQRIT
QKLILQPMAEVNFALQDVPETGVGSGLSDFELGLRLRYEVVKEFAPYVGVEWARKVGDTARFARAAGEDASGVSFVMGVR
AWF

Sequences:

>Translated_403_residues
MTRVALLLAGIAPLAFAVPAAAQSMDHSMHGAAPAPTPAPSPTPAPVAQSAPEAPAEGSMEQMDHGNMQGMDMEPEASSC
PPEHAAMGHCTPEAEAPGKGASDMGAMDHGAPQPSDPDCPPEHAKMGHCTPKGGSADAMAGMEGMATTSSASGTDLPPGD
ATAPAPPGDWYADRIYPQAEMEHSRHDMMKENGAQTIAFISFNLAEYQARKGRDGFRWDGEAWYGGDINRLTIKSEGEGV
FGEGIESAEVQALYSRAIGPYFNAQAGIRQDLGPGPDRTYATIGFEGLAPYWFEVEGALFLSNKGDLLARLEGYYDQRIT
QKLILQPMAEVNFALQDVPETGVGSGLSDFELGLRLRYEVVKEFAPYVGVEWARKVGDTARFARAAGEDASGVSFVMGVR
AWF
>Mature_402_residues
TRVALLLAGIAPLAFAVPAAAQSMDHSMHGAAPAPTPAPSPTPAPVAQSAPEAPAEGSMEQMDHGNMQGMDMEPEASSCP
PEHAAMGHCTPEAEAPGKGASDMGAMDHGAPQPSDPDCPPEHAKMGHCTPKGGSADAMAGMEGMATTSSASGTDLPPGDA
TAPAPPGDWYADRIYPQAEMEHSRHDMMKENGAQTIAFISFNLAEYQARKGRDGFRWDGEAWYGGDINRLTIKSEGEGVF
GEGIESAEVQALYSRAIGPYFNAQAGIRQDLGPGPDRTYATIGFEGLAPYWFEVEGALFLSNKGDLLARLEGYYDQRITQ
KLILQPMAEVNFALQDVPETGVGSGLSDFELGLRLRYEVVKEFAPYVGVEWARKVGDTARFARAAGEDASGVSFVMGVRA
WF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 42729; Mature: 42598

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVALLLAGIAPLAFAVPAAAQSMDHSMHGAAPAPTPAPSPTPAPVAQSAPEAPAEGSM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EQMDHGNMQGMDMEPEASSCPPEHAAMGHCTPEAEAPGKGASDMGAMDHGAPQPSDPDCP
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
PEHAKMGHCTPKGGSADAMAGMEGMATTSSASGTDLPPGDATAPAPPGDWYADRIYPQAE
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
MEHSRHDMMKENGAQTIAFISFNLAEYQARKGRDGFRWDGEAWYGGDINRLTIKSEGEGV
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCC
FGEGIESAEVQALYSRAIGPYFNAQAGIRQDLGPGPDRTYATIGFEGLAPYWFEVEGALF
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEEEECCEEE
LSNKGDLLARLEGYYDQRITQKLILQPMAEVNFALQDVPETGVGSGLSDFELGLRLRYEV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
VKEFAPYVGVEWARKVGDTARFARAAGEDASGVSFVMGVRAWF
HHHHHHHCCHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TRVALLLAGIAPLAFAVPAAAQSMDHSMHGAAPAPTPAPSPTPAPVAQSAPEAPAEGSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
EQMDHGNMQGMDMEPEASSCPPEHAAMGHCTPEAEAPGKGASDMGAMDHGAPQPSDPDCP
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
PEHAKMGHCTPKGGSADAMAGMEGMATTSSASGTDLPPGDATAPAPPGDWYADRIYPQAE
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHH
MEHSRHDMMKENGAQTIAFISFNLAEYQARKGRDGFRWDGEAWYGGDINRLTIKSEGEGV
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCC
FGEGIESAEVQALYSRAIGPYFNAQAGIRQDLGPGPDRTYATIGFEGLAPYWFEVEGALF
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCEEEEECCEEE
LSNKGDLLARLEGYYDQRITQKLILQPMAEVNFALQDVPETGVGSGLSDFELGLRLRYEV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
VKEFAPYVGVEWARKVGDTARFARAAGEDASGVSFVMGVRAWF
HHHHHHHCCHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]