| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487898
Identifier: 103487898
GI number: 103487898
Start: 2556595
End: 2557053
Strand: Direct
Name: 103487898
Synonym: Sala_2418
Alternate gene names: NA
Gene position: 2556595-2557053 (Clockwise)
Preceding gene: 103487896
Following gene: 103487905
Centisome position: 76.43
GC content: 68.41
Gene sequence:
>459_bases ATGGTTATATCTCTCGCTGCGGCATCGAGCAGCGCCCGACCGCGCGGCATGCCGGGCGCGGCGATGCCGGACACTTCGCG CAGCTTGTCCTCGACCGCCCGGGCGACATGCCGCGTCGGCACATGCTCCTTATTTTTTGTCCATATCGTGCCCGGCATGA GGATCGGGTTCGGGTTCGACAGGTTTCGGCGCTTCCGGCGCGGCCTTTGCCCGCGGCGGCACAGCGGCCTTCGCGGCGGG TTCTTGCTTGGGGCGGGATTTCTCCGGAGGCATCGCTTCTTCGGTCGGCGCCGCCGGGGCAGACGCGGCGGGCGGCTCGT CCGCTACGGGCATGGTCTCGACCATTGCGGGCGGCTCACCGGCAGTGACCTCACTCTGTTCCGGTGTGACGTCGCTCTGC TGCGCGGGCTCAGTGCCGCATCCTGCCAGAGCAAATATCAGCGCGGCGGCGCTCGCTAG
Upstream 100 bases:
>100_bases TTTGCGAAAGCTCTCGGCTTCGCCACCGAGCTATCTTCGCGGCCTTGGCATGACCAGAAATAATCACCACTCATCGCTAT AAACGAGATGGTTATTCCAT
Downstream 100 bases:
>100_bases GGGAATGAATCTCGTCATATCTGTCTCCTCTTCGTGTCGGCAGGTCATGCGCGGAATTCAGAAACCTTGCCGTCGCTGCC GAATGCCATCACTTCGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR
Sequences:
>Translated_152_residues MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR >Mature_152_residues MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFDRFRRFRRGLCPRRHSGLRGG FLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLTGSDLTLFRCDVALLRGLSAASCQSKYQRGGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16731; Mature: 16731
Theoretical pI: Translated: 12.56; Mature: 12.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFD CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHH RFRRFRRGLCPRRHSGLRGGFLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLT HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC GSDLTLFRCDVALLRGLSAASCQSKYQRGGAR CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MVISLAAASSSARPRGMPGAAMPDTSRSLSSTARATCRVGTCSLFFVHIVPGMRIGFGFD CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHH RFRRFRRGLCPRRHSGLRGGFLLGAGFLRRHRFFGRRRRGRRGGRLVRYGHGLDHCGRLT HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCC GSDLTLFRCDVALLRGLSAASCQSKYQRGGAR CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA