| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is arsC [H]
Identifier: 103487884
GI number: 103487884
Start: 2538708
End: 2539136
Strand: Direct
Name: arsC [H]
Synonym: Sala_2404
Alternate gene names: 103487884
Gene position: 2538708-2539136 (Clockwise)
Preceding gene: 103487883
Following gene: 103487885
Centisome position: 75.89
GC content: 65.27
Gene sequence:
>429_bases ATGACCGACATCGTCATCTACCATAACCCCGCCTGCGGGACCTCCCGCAACACCCTCGCGATGATTCGCAATGCCGGGAT CGAACCGCATGTCGTCGAGTATCTGAAGACGCCGCCGTCGCGTGCGCTGCTCGAACAGTTGATCGTCCGCGCCGGCATCA CGGCTCGCGAACTCCTGCGAGAGAAAGGCACGCCCTATGCGGAGCTGGGGCTCGGAGACATGGCCCTTGGCGACGAAGCG CTGATCGACGCGATGATGGCGCATCCCGCCCTGATCAACCGCCCGTTGGTGGTCTCGCCGCTCGGCGTGAAGCTCTGCCG TCCCTCCGAAACGGTACTCGACCTCATCCCTGCGGGGCAACGCGGCGCCTTCGCCAAGGAAGACGGCGAACAGGTAATCG ACGCCGCTGGCAACCGCGTCGGCGCCTGA
Upstream 100 bases:
>100_bases GGCCTGATGCTCTTCCTGGCGAAGGACTGCTGCCAAGGCCGGGCGGAGCTGTGCGAGCCGCTGCTCGCAGAACTCGCCTG CTGCTGAAGGAACGCGCGCT
Downstream 100 bases:
>100_bases GCCAAGCCGATGACAGAACCCAAGCGGGAACGGCTGTCGTTCCTCGATCGCTATCTCACCCTCTGGATCTTCCTCGCGAT GGCGCTCGGCGTGTTGCTCG
Product: arsenate reductase
Products: NA
Alternate protein names: Arsenical pump modifier [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTDIVIYHNPACGTSRNTLAMIRNAGIEPHVVEYLKTPPSRALLEQLIVRAGITARELLREKGTPYAELGLGDMALGDEA LIDAMMAHPALINRPLVVSPLGVKLCRPSETVLDLIPAGQRGAFAKEDGEQVIDAAGNRVGA
Sequences:
>Translated_142_residues MTDIVIYHNPACGTSRNTLAMIRNAGIEPHVVEYLKTPPSRALLEQLIVRAGITARELLREKGTPYAELGLGDMALGDEA LIDAMMAHPALINRPLVVSPLGVKLCRPSETVLDLIPAGQRGAFAKEDGEQVIDAAGNRVGA >Mature_141_residues TDIVIYHNPACGTSRNTLAMIRNAGIEPHVVEYLKTPPSRALLEQLIVRAGITARELLREKGTPYAELGLGDMALGDEAL IDAMMAHPALINRPLVVSPLGVKLCRPSETVLDLIPAGQRGAFAKEDGEQVIDAAGNRVGA
Specific function: Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance [H]
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1789918, Length=140, Percent_Identity=60, Blast_Score=186, Evalue=4e-49, Organism=Escherichia coli, GI1788841, Length=114, Percent_Identity=45.6140350877193, Blast_Score=103, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: =1.20.4.1 [H]
Molecular weight: Translated: 15150; Mature: 15019
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIVIYHNPACGTSRNTLAMIRNAGIEPHVVEYLKTPPSRALLEQLIVRAGITARELLR CCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH EKGTPYAELGLGDMALGDEALIDAMMAHPALINRPLVVSPLGVKLCRPSETVLDLIPAGQ HCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHCCCCC RGAFAKEDGEQVIDAAGNRVGA CCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TDIVIYHNPACGTSRNTLAMIRNAGIEPHVVEYLKTPPSRALLEQLIVRAGITARELLR CCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH EKGTPYAELGLGDMALGDEALIDAMMAHPALINRPLVVSPLGVKLCRPSETVLDLIPAGQ HCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCHHHHHHCCCCC RGAFAKEDGEQVIDAAGNRVGA CCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3021763; 1703401; 1704144 [H]