| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is arsB [H]
Identifier: 103487885
GI number: 103487885
Start: 2539146
End: 2540210
Strand: Direct
Name: arsB [H]
Synonym: Sala_2405
Alternate gene names: 103487885
Gene position: 2539146-2540210 (Clockwise)
Preceding gene: 103487884
Following gene: 103487886
Centisome position: 75.9
GC content: 61.5
Gene sequence:
>1065_bases ATGACAGAACCCAAGCGGGAACGGCTGTCGTTCCTCGATCGCTATCTCACCCTCTGGATCTTCCTCGCGATGGCGCTCGG CGTGTTGCTCGGTTCGGTGTTCACCGGCCTGCCCGCCGCGATCGATGCCCTCTCGTGGGGCTCGACCAACATCCCGATCG CGATCGGCCTTATCCTGATGATGTATCCGCCGCTCGCGCGCGTCCGCTACGAGGAATTGCCGCGCGTGTTCGAGGACAAA AGGGTGCTCGCCATCTCGCTCATCCAGAACTGGATCATCGGTCCCGTGCTGATGTTCGCGCTCGCGGTGATCTTCCTGTC AGACAAGCCCGAATATATGACCGGGCTGATCCTGATCGGCCTCGCGCGCTGCATCGCGATGGTGATCGTCTGGAACCAGC TCGCGAAGGGCGACAATCAATATGTCGCGGCACTGGTGGCGTTCAACTCGATCTTCCAGATCCTGTTCTTCAGCATCTAT GCCTGGTTCTTCCTGACGATATTGCCGCCGCTGTTCGGTCTCGAAGGCAGCGTTATCGACGTAAGCTTCTGGACCGTCGC CGAAGCCGTCCTCATTTATCTCGGCGTTCCCTTTGCGGCGGGCTATCTCACTCGCAAGTGGCTCGCAGACGCCAAGGGCA ACGAATGGTATGAGACGCGCTTCCTCCCGCGCATCGCGCCGATCACGCTTGTCGCGCTGCTCTTCACGATCGTCGCAATG TTCAGCCTCAAGGGCGGTGAGATCGTCACCATTCCCGGCGACGTCGTGCGCATCGCCGTCCCGCTGACCATCTATTTCGT CGTGCAGTTCGTCATCAGCTTCTGGATGGGCAAGCTGATCGAGGCCGATTATCCGCGCACGACCGCGGTCGCCTTCACCG CCGCCGGAAATAATTTCGAGCTTGCGATCGCGGTTGCGATTGCCGCCTTCGGGCTCGCCTCGCCGGTCGCCTTCGCCGCC GTCATCGGCCCGCTCGTCGAAGTTCCCGTGCTCATCCTGCTGGTGAGCGTCGCCTTCTGGTTCGGACGCCGCTGGTTCCC GGCATCCACCCCCGCGAAAGACTGA
Upstream 100 bases:
>100_bases CGACCTCATCCCTGCGGGGCAACGCGGCGCCTTCGCCAAGGAAGACGGCGAACAGGTAATCGACGCCGCTGGCAACCGCG TCGGCGCCTGAGCCAAGCCG
Downstream 100 bases:
>100_bases TTGTCATGGCTTCCCCCACCTTTTCGCGCCTGCGCGCGCTCGCCGATCCCACCCATCTTCCGGCGCTCAGCGCGGAATAT ATCCGCTCGCAGCCCGCGCT
Product: arsenical-resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTEPKRERLSFLDRYLTLWIFLAMALGVLLGSVFTGLPAAIDALSWGSTNIPIAIGLILMMYPPLARVRYEELPRVFEDK RVLAISLIQNWIIGPVLMFALAVIFLSDKPEYMTGLILIGLARCIAMVIVWNQLAKGDNQYVAALVAFNSIFQILFFSIY AWFFLTILPPLFGLEGSVIDVSFWTVAEAVLIYLGVPFAAGYLTRKWLADAKGNEWYETRFLPRIAPITLVALLFTIVAM FSLKGGEIVTIPGDVVRIAVPLTIYFVVQFVISFWMGKLIEADYPRTTAVAFTAAGNNFELAIAVAIAAFGLASPVAFAA VIGPLVEVPVLILLVSVAFWFGRRWFPASTPAKD
Sequences:
>Translated_354_residues MTEPKRERLSFLDRYLTLWIFLAMALGVLLGSVFTGLPAAIDALSWGSTNIPIAIGLILMMYPPLARVRYEELPRVFEDK RVLAISLIQNWIIGPVLMFALAVIFLSDKPEYMTGLILIGLARCIAMVIVWNQLAKGDNQYVAALVAFNSIFQILFFSIY AWFFLTILPPLFGLEGSVIDVSFWTVAEAVLIYLGVPFAAGYLTRKWLADAKGNEWYETRFLPRIAPITLVALLFTIVAM FSLKGGEIVTIPGDVVRIAVPLTIYFVVQFVISFWMGKLIEADYPRTTAVAFTAAGNNFELAIAVAIAAFGLASPVAFAA VIGPLVEVPVLILLVSVAFWFGRRWFPASTPAKD >Mature_353_residues TEPKRERLSFLDRYLTLWIFLAMALGVLLGSVFTGLPAAIDALSWGSTNIPIAIGLILMMYPPLARVRYEELPRVFEDKR VLAISLIQNWIIGPVLMFALAVIFLSDKPEYMTGLILIGLARCIAMVIVWNQLAKGDNQYVAALVAFNSIFQILFFSIYA WFFLTILPPLFGLEGSVIDVSFWTVAEAVLIYLGVPFAAGYLTRKWLADAKGNEWYETRFLPRIAPITLVALLFTIVAMF SLKGGEIVTIPGDVVRIAVPLTIYFVVQFVISFWMGKLIEADYPRTTAVAFTAAGNNFELAIAVAIAAFGLASPVAFAAV IGPLVEVPVLILLVSVAFWFGRRWFPASTPAKD
Specific function: Seems to confer resistance to arsenite by allowing cells to extrude this compound. Could be part of an arsenite extrusion pump [H]
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=320, Percent_Identity=34.375, Blast_Score=170, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 39145; Mature: 39014
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPKRERLSFLDRYLTLWIFLAMALGVLLGSVFTGLPAAIDALSWGSTNIPIAIGLILM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHH MYPPLARVRYEELPRVFEDKRVLAISLIQNWIIGPVLMFALAVIFLSDKPEYMTGLILIG HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LARCIAMVIVWNQLAKGDNQYVAALVAFNSIFQILFFSIYAWFFLTILPPLFGLEGSVID HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VSFWTVAEAVLIYLGVPFAAGYLTRKWLADAKGNEWYETRFLPRIAPITLVALLFTIVAM EHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH FSLKGGEIVTIPGDVVRIAVPLTIYFVVQFVISFWMGKLIEADYPRTTAVAFTAAGNNFE HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH LAIAVAIAAFGLASPVAFAAVIGPLVEVPVLILLVSVAFWFGRRWFPASTPAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TEPKRERLSFLDRYLTLWIFLAMALGVLLGSVFTGLPAAIDALSWGSTNIPIAIGLILM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHH MYPPLARVRYEELPRVFEDKRVLAISLIQNWIIGPVLMFALAVIFLSDKPEYMTGLILIG HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LARCIAMVIVWNQLAKGDNQYVAALVAFNSIFQILFFSIYAWFFLTILPPLFGLEGSVID HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VSFWTVAEAVLIYLGVPFAAGYLTRKWLADAKGNEWYETRFLPRIAPITLVALLFTIVAM EHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH FSLKGGEIVTIPGDVVRIAVPLTIYFVVQFVISFWMGKLIEADYPRTTAVAFTAAGNNFE HHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH LAIAVAIAAFGLASPVAFAAVIGPLVEVPVLILLVSVAFWFGRRWFPASTPAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895; 9537360 [H]