| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487867
Identifier: 103487867
GI number: 103487867
Start: 2515952
End: 2516254
Strand: Reverse
Name: 103487867
Synonym: Sala_2386
Alternate gene names: NA
Gene position: 2516254-2515952 (Counterclockwise)
Preceding gene: 103487868
Following gene: 103487866
Centisome position: 75.22
GC content: 60.73
Gene sequence:
>303_bases ATGTCCCAAGTCGATGGCAGCTATGATTGCGTCACCAAATCGCCGATGGGCGACCAGAAATCGGTTTTCACCGTCAAAAG CGACGGCGACAGCTTCACCGGCCAGAATGCGGGCGCGATGGGATCGCTCGACGTCGAAAATGGCAAGGTCGACGGCAACA AGCTGAGCTGGACCATGAACATGAAGGTGCCGATGCCGATGACGCTCGAATGCGAAGCGACGATCGACGGCGACACGCTG ACCGGCACGATCAAGGCCGGCGCCTTCGGTTCGATGGCGATGACCGGCACGCGCCAGGGCTGA
Upstream 100 bases:
>100_bases GCGACGCCGCGGTGGTGAAACCGCAGCTTGACGGATTGGGTCTGCCCGTGGAAACGGTGTCTCCCGCTAACTAACATCTG TTTCAGTAAGGAGAGCCCAT
Downstream 100 bases:
>100_bases TCGCTCCGCGATGGAACGAGGAAGGGCTGCCCCTCGCCGGGCGGCCCTTTTTTGTGCGGTGCGCGCGGGCGATGGCCGGT TTGGGATGGGGTGGGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSQVDGSYDCVTKSPMGDQKSVFTVKSDGDSFTGQNAGAMGSLDVENGKVDGNKLSWTMNMKVPMPMTLECEATIDGDTL TGTIKAGAFGSMAMTGTRQG
Sequences:
>Translated_100_residues MSQVDGSYDCVTKSPMGDQKSVFTVKSDGDSFTGQNAGAMGSLDVENGKVDGNKLSWTMNMKVPMPMTLECEATIDGDTL TGTIKAGAFGSMAMTGTRQG >Mature_99_residues SQVDGSYDCVTKSPMGDQKSVFTVKSDGDSFTGQNAGAMGSLDVENGKVDGNKLSWTMNMKVPMPMTLECEATIDGDTLT GTIKAGAFGSMAMTGTRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10427; Mature: 10296
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 9.0 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVDGSYDCVTKSPMGDQKSVFTVKSDGDSFTGQNAGAMGSLDVENGKVDGNKLSWTMN CCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCEEEEEEE MKVPMPMTLECEATIDGDTLTGTIKAGAFGSMAMTGTRQG ECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCC >Mature Secondary Structure SQVDGSYDCVTKSPMGDQKSVFTVKSDGDSFTGQNAGAMGSLDVENGKVDGNKLSWTMN CCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCEEEEEEE MKVPMPMTLECEATIDGDTLTGTIKAGAFGSMAMTGTRQG ECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA