Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487828

Identifier: 103487828

GI number: 103487828

Start: 2472758

End: 2473234

Strand: Reverse

Name: 103487828

Synonym: Sala_2347

Alternate gene names: NA

Gene position: 2473234-2472758 (Counterclockwise)

Preceding gene: 103487829

Following gene: 103487827

Centisome position: 73.93

GC content: 66.25

Gene sequence:

>477_bases
ATGTCCCGGCCCCCGCTTCCACCTTTCGACGCCGTCAGCGCGGCGCGCAAGGTCCGTCTGGCCGAAGACGGCTGGAACAG
TCGCGATCCCGCGCGCGTCGCGCTCGCCTACAGCGAGGATAGTGAATGGCGGAACCGCTCGACCTTTCTGACCGGGCGGG
ATGCGATCGTCGACTTCCTCACCGGCAAATGGCAGCGCGAACAGGATTATCGGCTGGTGAAGGGCCTGTGGGCTTTCTCC
GGCAACCGTATCGCGGTGCGTTTCGCCTATGAATGGCATGATGCCGAAGGCGGCTGGTGGCGCTCCTATGGCAATGAGAA
TTGGGAGTTTGCCGAAGACGGCACGATGCGGCGGCGGATCGCGAGCATCAACGATGTGGCGATCGCCGCCGCCGATCGCC
TGCTGCTCTGGCCGCGCGATGGGCGCGGCGACCGCCGCCCCGACGACCATCCGGGGCTGGAAGACCTGGGACTCTGA

Upstream 100 bases:

>100_bases
AACCGATCCGCGAGGGCGCGACGACGCACCATTTCATCTGCGCGATGCCCGGCGGCATCCGCATCGAATTTGCCACCCCT
TTCGCCTGAAGACGCGCGTC

Downstream 100 bases:

>100_bases
CCGGAGAAAGACCATGCCTTATGTCAACATCCGCATCACGCGCGAGGGCGCGACGGCCGCGCAGAAGGCCGAACTGATCG
CCGGAGTGACCGACCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSRPPLPPFDAVSAARKVRLAEDGWNSRDPARVALAYSEDSEWRNRSTFLTGRDAIVDFLTGKWQREQDYRLVKGLWAFS
GNRIAVRFAYEWHDAEGGWWRSYGNENWEFAEDGTMRRRIASINDVAIAAADRLLLWPRDGRGDRRPDDHPGLEDLGL

Sequences:

>Translated_158_residues
MSRPPLPPFDAVSAARKVRLAEDGWNSRDPARVALAYSEDSEWRNRSTFLTGRDAIVDFLTGKWQREQDYRLVKGLWAFS
GNRIAVRFAYEWHDAEGGWWRSYGNENWEFAEDGTMRRRIASINDVAIAAADRLLLWPRDGRGDRRPDDHPGLEDLGL
>Mature_157_residues
SRPPLPPFDAVSAARKVRLAEDGWNSRDPARVALAYSEDSEWRNRSTFLTGRDAIVDFLTGKWQREQDYRLVKGLWAFSG
NRIAVRFAYEWHDAEGGWWRSYGNENWEFAEDGTMRRRIASINDVAIAAADRLLLWPRDGRGDRRPDDHPGLEDLGL

Specific function: Unknown

COG id: COG3558

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18221; Mature: 18090

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPPLPPFDAVSAARKVRLAEDGWNSRDPARVALAYSEDSEWRNRSTFLTGRDAIVDFL
CCCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHH
TGKWQREQDYRLVKGLWAFSGNRIAVRFAYEWHDAEGGWWRSYGNENWEFAEDGTMRRRI
CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHH
ASINDVAIAAADRLLLWPRDGRGDRRPDDHPGLEDLGL
HCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SRPPLPPFDAVSAARKVRLAEDGWNSRDPARVALAYSEDSEWRNRSTFLTGRDAIVDFL
CCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHH
TGKWQREQDYRLVKGLWAFSGNRIAVRFAYEWHDAEGGWWRSYGNENWEFAEDGTMRRRI
CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHH
ASINDVAIAAADRLLLWPRDGRGDRRPDDHPGLEDLGL
HCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA